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2 followers · 4 following
  • Sabanci University

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Achievement: QuickdrawAchievement: Pull Shark

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@SUcompBio @CompGenomeLab

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  1. CompGenomeLab/ner_rnapii_3d CompGenomeLab/ner_rnapii_3d Public

    1D loop-extrusion simulation engine modeling RNAPII transcription, DNA lesions, CTCF boundaries, and repair dynamics

    Python

  2. CompGenomeLab/ggner-3d CompGenomeLab/ggner-3d Public

    Analysis code for RNAPII, nucleotide excision repair, and 3D genome dynamics after UV damage

    Jupyter Notebook

  3. CompGenomeLab/uv-3d-ddr CompGenomeLab/uv-3d-ddr Public

    Genome architecture analysis, dataset generation, and GNN training/inference from the study 'UV-induced reorganization of 3D genome mediates DNA damage response'.

    Jupyter Notebook 2 2