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openproblems-bio / task_ist_preprocessing Public

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Add allen brain#146

Merged

dariarom94 merged 5 commits into

mainopenproblems-bio/task_ist_preprocessing:mainfrom

add-allen-brainopenproblems-bio/task_ist_preprocessing:add-allen-brainCopy head branch name to clipboard

Jun 21, 2026

Conversation Commits5 (5)Checks Files changed

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Add allen brain#146
dariarom94 merged 5 commits into
mainfrom
add-allen-brain

config to gpu

24bf600

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Test on: pull_request 9

build / List components to test

build / Test (watershed, methods_segmentation, src/methods_segmentation/watershed/config.vsh.yaml, src/me...

build / Test (stardist, methods_segmentation, src/methods_segmentation/stardist/config.vsh.yaml, src/meth...

build / Test (cellpose, methods_segmentation, src/methods_segmentation/cellpose/config.vsh.yaml, src/meth...

build / Test (binning, methods_segmentation, src/methods_segmentation/binning/config.vsh.yaml, src/method...

build / Test (custom_segmentation, methods_segmentation, src/methods_segmentation/custom_segmentation/con...

build / Test (process_dataset, data_processors, src/data_processors/process_dataset/config.vsh.yaml, src/...

build / Test (allen_brain_cell_atlas_merfish, datasets/loaders, src/datasets/loaders/allen_brain_cell_atl...

build / Test (bruker_cosmx, datasets/loaders, src/datasets/loaders/bruker_cosmx/config.vsh.yaml, src/data...

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