[rush] Relocate remaining pnpm settings to pnpm-workspace.yaml for pnpm 11

common/changes/@microsoft/rush/more-install-helpers-cleanup2_2026-07-18-00-21-22.json

@@ -0,0 +1,11 @@
+{
+  "changes": [
+    {
+      "comment": "Fixed an issue where the pnpm `ignoredOptionalDependencies`, `trustPolicy`, `trustPolicyExclude`, and `trustPolicyIgnoreAfterMinutes` settings were written to the `pnpm` field of the generated `package.json` (which pnpm 11 ignores) instead of `pnpm-workspace.yaml`, causing them to be silently ignored under pnpm 11.",
+      "type": "patch",
+      "packageName": "@microsoft/rush"
+    }
+  ],
+  "packageName": "@microsoft/rush",
+  "email": "iclanton@users.noreply.github.com"
+}

libraries/rush-lib/src/cli/RushPnpmCommandLineParser.ts

@@ -545,10 +545,10 @@ export class RushPnpmCommandLineParser {
         let newGlobalPatchedDependencies: Record<string, string> | undefined;
         if (semver.gte(pnpmVersion, '11.0.0')) {
           // PNPM 11+ stores patchedDependencies in pnpm-workspace.yaml instead of the package.json "pnpm" field
-          const workspaceFile: PnpmWorkspaceFile = await PnpmWorkspaceFile.loadAsync(
+          const workspaceFile: PnpmWorkspaceFile | undefined = await PnpmWorkspaceFile.tryLoadAsync(
             `${subspaceTempFolder}/${RushConstants.pnpmWorkspaceFileName}`
           );
-          newGlobalPatchedDependencies = workspaceFile.patchedDependencies;
+          newGlobalPatchedDependencies = workspaceFile?.patchedDependencies;
         } else {
           // PNPM 10.x and earlier store patchedDependencies in the package.json "pnpm" field
           // Example: "C:\MyRepo\common\temp\package.json"
@@ -613,10 +613,10 @@ export class RushPnpmCommandLineParser {
 
         if (semver.gte(pnpmVersion, '11.0.0')) {
           // PNPM 11+ uses allowBuilds in pnpm-workspace.yaml instead of onlyBuiltDependencies in package.json
-          const workspaceFile: PnpmWorkspaceFile = await PnpmWorkspaceFile.loadAsync(
+          const workspaceFile: PnpmWorkspaceFile | undefined = await PnpmWorkspaceFile.tryLoadAsync(
             `${subspaceTempFolder}/${RushConstants.pnpmWorkspaceFileName}`
           );
-          const newGlobalAllowBuilds: Record<string, boolean> | undefined = workspaceFile.allowBuilds;
+          const newGlobalAllowBuilds: Record<string, boolean> | undefined = workspaceFile?.allowBuilds;
           const currentGlobalAllowBuilds: Record<string, boolean> | undefined =
             pnpmOptions?.globalAllowBuilds;
 

libraries/rush-lib/src/logic/installManager/InstallHelpers.ts

@@ -48,10 +48,10 @@ interface ICommonPackageJson extends IPackageJson {
  */
 export interface IResolvedPnpmSettings {
   /**
-   * The "pnpm" field to write into `common/temp/package.json`. For pnpm 11+, settings that pnpm
-   * no longer reads from package.json are omitted here and appear in {@link workspaceFile}.
+   * The "pnpm" field to write into `common/temp/package.json`, or `undefined` for pnpm 11+ (which
+   * no longer reads that field — all settings are placed on {@link workspaceFile} instead).
    */
-  packageJsonPnpmSection: ICommonPackageJsonPnpmSection;
+  packageJsonPnpmSection: ICommonPackageJsonPnpmSection | undefined;
 
   /**
    * Additional top-level properties to merge into `common/temp/package.json`
@@ -324,33 +324,36 @@ export class InstallHelpers {
     workspaceFile.minimumReleaseAge = minimumReleaseAgeMinutes;
     workspaceFile.minimumReleaseAgeExclude = minimumReleaseAgeExclude;
 
-    // pnpm 11 no longer reads the "pnpm" field of package.json. For pnpm 11+, the overrides,
-    // packageExtensions, peerDependencyRules, allowedDeprecatedVersions, and patchedDependencies
-    // settings are written to common/temp/pnpm-workspace.yaml (see workspaceSettings below) instead.
+    // pnpm 11 no longer reads the "pnpm" field of package.json, so for pnpm 11+ we don't generate
+    // it at all; every setting is written to common/temp/pnpm-workspace.yaml instead.
     // See https://github.com/microsoft/rushstack/issues/5837
-    const packageJsonPnpmSection: ICommonPackageJsonPnpmSection = {
-      neverBuiltDependencies,
-      onlyBuiltDependencies,
-      ignoredOptionalDependencies: globalIgnoredOptionalDependencies,
-      trustPolicy,
-      trustPolicyExclude,
-      trustPolicyIgnoreAfter
-    };
+    let packageJsonPnpmSection: ICommonPackageJsonPnpmSection | undefined;
 
     if (isPnpm11) {
-      // These are written to pnpm-workspace.yaml only for pnpm 11+ (see note above); for older pnpm
-      // they live in packageJsonPnpmSection instead and are left undefined here.
       workspaceFile.overrides = globalOverrides;
       workspaceFile.packageExtensions = globalPackageExtensions;
       workspaceFile.peerDependencyRules = globalPeerDependencyRules;
       workspaceFile.allowedDeprecatedVersions = globalAllowedDeprecatedVersions;
       workspaceFile.patchedDependencies = globalPatchedDependencies;
+      workspaceFile.ignoredOptionalDependencies = globalIgnoredOptionalDependencies;
+      workspaceFile.trustPolicy = trustPolicy;
+      workspaceFile.trustPolicyExclude = trustPolicyExclude;
+      workspaceFile.trustPolicyIgnoreAfter = trustPolicyIgnoreAfter;
     } else {
-      packageJsonPnpmSection.overrides = globalOverrides;
-      packageJsonPnpmSection.packageExtensions = globalPackageExtensions;
-      packageJsonPnpmSection.peerDependencyRules = globalPeerDependencyRules;
-      packageJsonPnpmSection.allowedDeprecatedVersions = globalAllowedDeprecatedVersions;
-      packageJsonPnpmSection.patchedDependencies = globalPatchedDependencies;
+      // For older pnpm, these settings live in the "pnpm" field of package.json.
+      packageJsonPnpmSection = {
+        neverBuiltDependencies,
+        onlyBuiltDependencies,
+        overrides: globalOverrides,
+        packageExtensions: globalPackageExtensions,
+        peerDependencyRules: globalPeerDependencyRules,
+        allowedDeprecatedVersions: globalAllowedDeprecatedVersions,
+        patchedDependencies: globalPatchedDependencies,
+        ignoredOptionalDependencies: globalIgnoredOptionalDependencies,
+        trustPolicy,
+        trustPolicyExclude,
+        trustPolicyIgnoreAfter
+      };
     }
 
     return {

libraries/rush-lib/src/logic/pnpm/PnpmWorkspaceFile.ts

@@ -9,7 +9,11 @@ import { FileSystem, Sort, Path } from '@rushstack/node-core-library';
 
 import { BaseWorkspaceFile } from '../base/BaseWorkspaceFile';
 import { PNPM_SHRINKWRAP_YAML_FORMAT } from './PnpmYamlCommon';
-import type { IPnpmPackageExtension, IPnpmPeerDependencyRules } from './PnpmOptionsConfiguration';
+import type {
+  IPnpmPackageExtension,
+  IPnpmPeerDependencyRules,
+  PnpmTrustPolicy
+} from './PnpmOptionsConfiguration';
 
 /**
  * This interface represents the raw pnpm-workspace.YAML file
@@ -71,6 +75,32 @@ interface IPnpmWorkspaceYaml {
    * (SUPPORTED ONLY IN PNPM 11.0.0 AND NEWER)
    */
   patchedDependencies: Record<string, string> | undefined;
+  /**
+   * Optional dependencies whose names are listed here are skipped during installation. In pnpm 11+
+   * this replaces the `pnpm.ignoredOptionalDependencies` field of `package.json`, which pnpm no
+   * longer reads.
+   * (SUPPORTED ONLY IN PNPM 9.0.0 AND NEWER)
+   */
+  ignoredOptionalDependencies: string[] | undefined;
+  /**
+   * The trust policy applied when installing packages. In pnpm 11+ this replaces the
+   * `pnpm.trustPolicy` field of `package.json`, which pnpm no longer reads.
+   * (SUPPORTED ONLY IN PNPM 10.21.0 AND NEWER)
+   */
+  trustPolicy: PnpmTrustPolicy | undefined;
+  /**
+   * Package selectors excluded from the trust policy check. In pnpm 11+ this replaces the
+   * `pnpm.trustPolicyExclude` field of `package.json`, which pnpm no longer reads.
+   * (SUPPORTED ONLY IN PNPM 10.22.0 AND NEWER)
+   */
+  trustPolicyExclude: string[] | undefined;
+  /**
+   * Ignore the trust policy check for packages published more than this many minutes ago. In
+   * pnpm 11+ this replaces the `pnpm.trustPolicyIgnoreAfter` field of `package.json`, which pnpm
+   * no longer reads.
+   * (SUPPORTED ONLY IN PNPM 10.27.0 AND NEWER)
+   */
+  trustPolicyIgnoreAfter: number | undefined;
   /**
    * The minimum number of minutes that must pass after a version is published before pnpm will install it.
    * (SUPPORTED ONLY IN PNPM 10.16.0 AND NEWER)
@@ -97,6 +127,10 @@ export class PnpmWorkspaceFile extends BaseWorkspaceFile {
   public peerDependencyRules: IPnpmWorkspaceYaml['peerDependencyRules'];
   public allowedDeprecatedVersions: IPnpmWorkspaceYaml['allowedDeprecatedVersions'];
   public patchedDependencies: IPnpmWorkspaceYaml['patchedDependencies'];
+  public ignoredOptionalDependencies: IPnpmWorkspaceYaml['ignoredOptionalDependencies'];
+  public trustPolicy: IPnpmWorkspaceYaml['trustPolicy'];
+  public trustPolicyExclude: IPnpmWorkspaceYaml['trustPolicyExclude'];
+  public trustPolicyIgnoreAfter: IPnpmWorkspaceYaml['trustPolicyIgnoreAfter'];
   public minimumReleaseAge: IPnpmWorkspaceYaml['minimumReleaseAge'];
   public minimumReleaseAgeExclude: IPnpmWorkspaceYaml['minimumReleaseAgeExclude'];
 
@@ -124,24 +158,53 @@ export class PnpmWorkspaceFile extends BaseWorkspaceFile {
    *
    * @param workspaceYamlFilename - The path to the `pnpm-workspace.yaml` file
    */
-  public static async loadAsync(workspaceYamlFilename: string): Promise<PnpmWorkspaceFile> {
-    const workspaceYamlContent: string = await FileSystem.readFileAsync(workspaceYamlFilename);
+  public static async tryLoadAsync(workspaceYamlFilename: string): Promise<PnpmWorkspaceFile | undefined> {
+    let workspaceYamlContent: string;
+    try {
+      workspaceYamlContent = await FileSystem.readFileAsync(workspaceYamlFilename);
+    } catch (error) {
+      if (FileSystem.isNotExistError(error)) {
+        return undefined;
+      } else {
+        throw error;
+      }
+    }
+
     const yamlModule: typeof import('js-yaml') = await import('js-yaml');
     const workspaceYaml: IPnpmWorkspaceYaml | undefined = yamlModule.load(workspaceYamlContent) as
       | IPnpmWorkspaceYaml
       | undefined;
 
     const workspaceFile: PnpmWorkspaceFile = new PnpmWorkspaceFile(workspaceYamlFilename);
     if (workspaceYaml) {
-      workspaceFile.catalogs = workspaceYaml.catalogs;
-      workspaceFile.allowBuilds = workspaceYaml.allowBuilds;
-      workspaceFile.overrides = workspaceYaml.overrides;
-      workspaceFile.packageExtensions = workspaceYaml.packageExtensions;
-      workspaceFile.peerDependencyRules = workspaceYaml.peerDependencyRules;
-      workspaceFile.allowedDeprecatedVersions = workspaceYaml.allowedDeprecatedVersions;
-      workspaceFile.patchedDependencies = workspaceYaml.patchedDependencies;
-      workspaceFile.minimumReleaseAge = workspaceYaml.minimumReleaseAge;
-      workspaceFile.minimumReleaseAgeExclude = workspaceYaml.minimumReleaseAgeExclude;
+      const {
+        catalogs,
+        allowBuilds,
+        overrides,
+        packageExtensions,
+        peerDependencyRules,
+        allowedDeprecatedVersions,
+        patchedDependencies,
+        ignoredOptionalDependencies,
+        trustPolicy,
+        trustPolicyExclude,
+        trustPolicyIgnoreAfter,
+        minimumReleaseAge,
+        minimumReleaseAgeExclude
+      } = workspaceYaml;
+      workspaceFile.catalogs = catalogs;
+      workspaceFile.allowBuilds = allowBuilds;
+      workspaceFile.overrides = overrides;
+      workspaceFile.packageExtensions = packageExtensions;
+      workspaceFile.peerDependencyRules = peerDependencyRules;
+      workspaceFile.allowedDeprecatedVersions = allowedDeprecatedVersions;
+      workspaceFile.patchedDependencies = patchedDependencies;
+      workspaceFile.ignoredOptionalDependencies = ignoredOptionalDependencies;
+      workspaceFile.trustPolicy = trustPolicy;
+      workspaceFile.trustPolicyExclude = trustPolicyExclude;
+      workspaceFile.trustPolicyIgnoreAfter = trustPolicyIgnoreAfter;
+      workspaceFile.minimumReleaseAge = minimumReleaseAge;
+      workspaceFile.minimumReleaseAgeExclude = minimumReleaseAgeExclude;
     }
 
     return workspaceFile;
@@ -159,9 +222,6 @@ export class PnpmWorkspaceFile extends BaseWorkspaceFile {
   }
 
   protected override async serializeAsync(): Promise<string> {
-    // Ensure stable sort order when serializing
-    Sort.sortSet(this._workspacePackages);
-
     const {
       _workspacePackages: workspacePackages,
       catalogs,
@@ -171,9 +231,15 @@ export class PnpmWorkspaceFile extends BaseWorkspaceFile {
       peerDependencyRules,
       allowedDeprecatedVersions,
       patchedDependencies,
+      ignoredOptionalDependencies,
+      trustPolicy,
+      trustPolicyExclude,
+      trustPolicyIgnoreAfter,
       minimumReleaseAge,
       minimumReleaseAgeExclude
     } = this;
+    // Ensure stable sort order when serializing
+    Sort.sortSet(workspacePackages);
     const workspaceYaml: IPnpmWorkspaceYaml = {
       packages: Array.from(workspacePackages),
       // js-yaml omits mapping entries whose value is `undefined`, so no guard is needed here.
@@ -185,6 +251,10 @@ export class PnpmWorkspaceFile extends BaseWorkspaceFile {
       peerDependencyRules,
       allowedDeprecatedVersions,
       patchedDependencies,
+      ignoredOptionalDependencies,
+      trustPolicy,
+      trustPolicyExclude,
+      trustPolicyIgnoreAfter,
       minimumReleaseAge,
       minimumReleaseAgeExclude
     };

libraries/rush-lib/src/logic/pnpm/test/PnpmWorkspaceFile.test.ts

@@ -350,44 +350,56 @@ describe(PnpmWorkspaceFile.name, () => {
     });
   });
 
-  describe(PnpmWorkspaceFile.loadAsync.name, () => {
+  describe(PnpmWorkspaceFile.tryLoadAsync.name, () => {
     let mockReadFileAsync: jest.SpyInstance;
 
-    beforeEach(() => {
-      // Mock FileSystem.readFileAsync to return the content captured by the FileSystem.writeFile mock
-      mockReadFileAsync = jest.spyOn(FileSystem, 'readFileAsync').mockImplementation(async () => {
-        if (writtenContent === undefined) {
-          throw new Error('File not found');
-        }
-        return writtenContent;
+    describe('file exists', () => {
+      beforeEach(() => {
+        // Mock FileSystem.readFileAsync to return the content captured by the FileSystem.writeFile mock
+        mockReadFileAsync = jest.spyOn(FileSystem, 'readFileAsync').mockImplementation(async () => {
+          if (writtenContent === undefined) {
+            throw new Error('File not found');
+          }
+
+          return writtenContent;
+        });
       });
-    });
 
-    afterEach(() => {
-      mockReadFileAsync.mockRestore();
-    });
+      afterEach(() => {
+        mockReadFileAsync.mockRestore();
+      });
 
-    it('reads patchedDependencies from an existing workspace file', async () => {
-      const workspaceFile: PnpmWorkspaceFile = new PnpmWorkspaceFile(workspaceFilePath);
-      workspaceFile.addPackage(`${projectsDir}/app1`);
-      workspaceFile.patchedDependencies = {
-        'lodash@4.17.21': 'patches/lodash@4.17.21.patch'
-      };
-      await workspaceFile.saveAsync(workspaceFilePath, { onlyIfChanged: true });
+      it('reads patchedDependencies from an existing workspace file', async () => {
+        const workspaceFile: PnpmWorkspaceFile = new PnpmWorkspaceFile(workspaceFilePath);
+        workspaceFile.addPackage(`${projectsDir}/app1`);
+        workspaceFile.patchedDependencies = {
+          'lodash@4.17.21': 'patches/lodash@4.17.21.patch'
+        };
+        await workspaceFile.saveAsync(workspaceFilePath, { onlyIfChanged: true });
+
+        const loadedWorkspaceFile: PnpmWorkspaceFile | undefined =
+          await PnpmWorkspaceFile.tryLoadAsync(workspaceFilePath);
+        expect(loadedWorkspaceFile?.patchedDependencies).toEqual({
+          'lodash@4.17.21': 'patches/lodash@4.17.21.patch'
+        });
+      });
 
-      const loadedWorkspaceFile: PnpmWorkspaceFile = await PnpmWorkspaceFile.loadAsync(workspaceFilePath);
-      expect(loadedWorkspaceFile.patchedDependencies).toEqual({
-        'lodash@4.17.21': 'patches/lodash@4.17.21.patch'
+      it('returns undefined when the workspace file has no patchedDependencies', async () => {
+        const workspaceFile: PnpmWorkspaceFile = new PnpmWorkspaceFile(workspaceFilePath);
+        workspaceFile.addPackage(`${projectsDir}/app1`);
+        await workspaceFile.saveAsync(workspaceFilePath, { onlyIfChanged: true });
+
+        const loadedWorkspaceFile: PnpmWorkspaceFile | undefined =
+          await PnpmWorkspaceFile.tryLoadAsync(workspaceFilePath);
+        expect(loadedWorkspaceFile!.patchedDependencies).toBeUndefined();
       });
     });
 
-    it('returns undefined when the workspace file has no patchedDependencies', async () => {
-      const workspaceFile: PnpmWorkspaceFile = new PnpmWorkspaceFile(workspaceFilePath);
-      workspaceFile.addPackage(`${projectsDir}/app1`);
-      await workspaceFile.saveAsync(workspaceFilePath, { onlyIfChanged: true });
-
-      const loadedWorkspaceFile: PnpmWorkspaceFile = await PnpmWorkspaceFile.loadAsync(workspaceFilePath);
-      expect(loadedWorkspaceFile.patchedDependencies).toBeUndefined();
+    it("handles the case when the file doesn't exist", async () => {
+      const loadedWorkspaceFile: PnpmWorkspaceFile | undefined = await PnpmWorkspaceFile.tryLoadAsync(
+        `${__dirname}/file-that-does-not-exist.yaml`
+      );
+      expect(loadedWorkspaceFile).toBeUndefined();
     });
   });
 
@@ -425,6 +437,10 @@ describe(PnpmWorkspaceFile.name, () => {
       workspaceFile.patchedDependencies = {
         'lodash@4.17.21': 'patches/lodash@4.17.21.patch'
       };
+      workspaceFile.ignoredOptionalDependencies = ['fsevents'];
+      workspaceFile.trustPolicy = 'no-downgrade';
+      workspaceFile.trustPolicyExclude = ['chokidar@4.0.3'];
+      workspaceFile.trustPolicyIgnoreAfter = 1440;
 
       await workspaceFile.saveAsync(workspaceFilePath, { onlyIfChanged: true });
 

libraries/rush-lib/src/logic/pnpm/test/__snapshots__/PnpmWorkspaceFile.test.ts.snap

@@ -104,6 +104,8 @@ allowedDeprecatedVersions:
 catalogs:
   default:
     react: ^18.0.0
+ignoredOptionalDependencies:
+  - fsevents
 overrides:
   foo@1.0.0: 1.0.1
 packageExtensions:
@@ -117,6 +119,10 @@ patchedDependencies:
 peerDependencyRules:
   allowedVersions:
     react: '18'
+trustPolicy: no-downgrade
+trustPolicyExclude:
+  - chokidar@4.0.3
+trustPolicyIgnoreAfter: 1440
 "
 `;