Skip to content

Visualizing MetaCompass assembly results

Jump to bottom
Victoria Cepeda edited this page Sep 5, 2018 · 3 revisions

Alignment Visualization

Intermediate files mapping files (bam files) can be visualized in IGV. In the following example files from "pilon_output" were used as input.

overview

Assembly Graph Visualization

Additionally, assembly graphs can be visualized in metagenome scope

  1. Home
  2. Running MetaCompass
  3. MetaCompass STEPS
  4. Examples of real assembly with MetaCompass
  5. Analyzing MetaCompass results
  6. Visualizing MetaCompass assembly results

Clone this wiki locally