Sync upstream/drift with upstream/dev in August 2026 - #275
Merged
bobleesj merged 188 commits intoAug 2, 2026
Conversation
…ffractive_imaging
…ffractive_imaging
…ion, constructors, define_lattice() and AutoSerialize implementation.
…re/update-lockfile-20260608 chore: Update dependencies
…re/update-lockfile-20260615 chore: Update dependencies
…_hotfix Normalizing by the quantile now an option in Tomo Dataset
…er than comparing the shapes within the tilt series stack.
…_hotfix Tomography Dataset Hotfix
…re/update-lockfile-20260629 chore: Update dependencies
…re/update-lockfile-20260706 chore: Update dependencies
create_batch_rays and integrate_rays were decorated with @torch.compile(mode="reduce-overhead"). Calling them triggers TorchInductor, which needs a C compiler to build its kernel. On Windows runners without MSVC (cl.exe) on PATH this raises InductorError, failing tests/tomography/test_dataset_models.py::TestINRRayMath on windows-latest. Both are trivial tensor ops (a small fill and a single reduction) and reduce-overhead is a no-op on CPU, so eager execution is equivalent and portable across platforms.
…-torch-compile-rays Remove torch.compile from INR ray helpers for Windows compatibility
…ease/0.1.9 Bump version to 0.1.9
…re/update-lockfile-20260713 chore: Update dependencies
Sync main to dev
…re/update-lockfile-20260720 chore: Update dependencies
…re/update-lockfile-20260727 chore: Update dependencies
bobleesj
marked this pull request as ready for review
August 2, 2026 02:31
Collaborator
Author
|
Merging - no side effect. |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
9 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Prepping to make a PR for multidimensional drift correction into
upstream/dev