Issues

• access to the cryoet dataset of SynapseNet Deposited to DataPortal

  computational-cell-analytics/synapse-net#174 · Filter by author noushinha opened on Jul 9, 2026

• IMOD Segmentation Exports are misaligned

  computational-cell-analytics/synapse-net#151 · Filter by author constantinpape opened on Nov 27, 2025

• IMOD Export not working on windows

  computational-cell-analytics/synapse-net#150 · Filter by author constantinpape opened on Nov 27, 2025

• Print the voxel size in napari plugin

  computational-cell-analytics/synapse-net#125 · Filter by author constantinpape opened on Jun 20, 2025

• Update voxel size in distance measurement budget so that it matches the value loaded from the mrc file

  computational-cell-analytics/synapse-net#112 · Filter by author constantinpape opened on Mar 3, 2025

• Check that color is not changed if a pool in vesicle pool is updated

  computational-cell-analytics/synapse-net#111 · Filter by author constantinpape opened on Mar 3, 2025

• Update the message in the progress bar during segmentation

  computational-cell-analytics/synapse-net#109 · Filter by author constantinpape opened on Mar 3, 2025

• Add other vesicle model types to CLI

  computational-cell-analytics/synapse-net#105 · Filter by author constantinpape opened on Feb 27, 2025
  4

  

• napari plugin: Morphology Analysis measure structure morphology

  bug
  computational-cell-analytics/synapse-net#103 · Filter by author lufre1 opened on Feb 26, 2025

• Add CLI to export points to a simpler format

  enhancement
  computational-cell-analytics/synapse-net#86 · Filter by author constantinpape opened on Dec 11, 2024

• fail to process reasonable 3d dataset

  bug
  computational-cell-analytics/synapse-net#82 · Filter by author bpavie opened on Dec 10, 2024
  6

  

• Some updates to segmentation CLI

  computational-cell-analytics/synapse-net#64 · Filter by author constantinpape opened on Nov 24, 2024
  1