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alberlab

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igm igm Public

Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures

Python 12 5

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Showing 10 of 18 repositories

RepTile Public
RepTile: inference of single-locus DNA replication states from genome-wide multiplexed DNA FISH

alberlab/RepTile's past year of commit activity

Python 0 MIT 0 0 0 Updated Aug 3, 2026
alabtools Public
New Version tools for lab utilities

alberlab/alabtools's past year of commit activity

Python 1 GPL-3.0 3 0 0 Updated Feb 4, 2026
IGM-Plus Public
New version of IGM - integrative Genome Modeling

alberlab/IGM-Plus's past year of commit activity

Python 0 GPL-3.0 1 0 0 Updated Jan 16, 2026
lammpgen Public Forked from lammps/lammps
Modified version of LAMMPS MD to support integrated genome modeling

alberlab/lammpgen's past year of commit activity

C++ 0 GPL-2.0 2,038 0 0 Updated Aug 8, 2025
MaxComp Public

alberlab/MaxComp's past year of commit activity

Python 0 GPL-3.0 1 1 0 Updated Aug 3, 2025
Conformation_Analysis Public

alberlab/Conformation_Analysis's past year of commit activity

Python 0 GPL-3.0 1 0 0 Updated Aug 3, 2025
genome3danalysis Public
Package for analyzing 3D genome features.

alberlab/genome3danalysis's past year of commit activity

Python 0 1 0 0 Updated Apr 17, 2024
igm Public
Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures

alberlab/igm's past year of commit activity

Python 12 GPL-3.0 5 4 0 Updated Jun 15, 2023
IGM_2.0 Public
IGM with new assignment step for HiC, requires linear scaling only

alberlab/IGM_2.0's past year of commit activity

Python 2 GPL-3.0 1 0 0 Updated Apr 6, 2023
Lorenzo_trial Public
trying to figure out if I can push/pull

alberlab/Lorenzo_trial's past year of commit activity

0 1 0 0 Updated Mar 22, 2023

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