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CoreToolkit
CoreToolkit PublicCore C++ library providing math primitives (Vector3, Matrix3, Quaternion), spatial data structures (KD-trees, octrees), simulation cell handling, and parallel algorithms for molecular dynamics anal…
C++
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atomic-strain
atomic-strain PublicComputes per-atom strain tensors from atomic configurations. Calculates Green-Lagrangian strain, von Mises strain, and principal strains for deformation analysis in molecular dynamics simulations.
C++
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centrosymmetry-parameter
centrosymmetry-parameter PublicCalculates the centrosymmetry parameter (CSP) for each atom to detect point defects, surfaces, and dislocation cores. Useful for visualizing crystal defects in FCC and BCC metals.
C++ 1
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cluster-analysis
cluster-analysis PublicGroups particles into clusters based on distance cutoff or bond topology. Identifies connected components, computes cluster sizes, centers of mass, and gyration tensors .
C++
Repositories
- VOLT Public
The next-generation platform designed for high-performance research teams and enthusiastic materials scientists!
- reference-crystal-matching Public
- opendxa Public
Modular DXA-implementation. Supports multiple lattice types and structure identification methods including PTM, CNA, and Diamond structure analysis. Identifies dislocation lines, computes Burgers vectors, constructs dislocation networks, and exports results for visualization.
- atomic-strain Public
Computes per-atom strain tensors from atomic configurations. Calculates Green-Lagrangian strain, von Mises strain, and principal strains for deformation analysis in molecular dynamics simulations.
- centrosymmetry-parameter Public
Calculates the centrosymmetry parameter (CSP) for each atom to detect point defects, surfaces, and dislocation cores. Useful for visualizing crystal defects in FCC and BCC metals.
- chill-plus Public
Chill+ ice/hydrate structure classifier: identifies hexagonal ice, cubic ice, interfacial ice, hydrate and interfacial hydrate via spherical harmonic bond-order correlation (Nguyen & Molinero 2015).
- cluster-analysis Public
Groups particles into clusters based on distance cutoff or bond topology. Identifies connected components, computes cluster sizes, centers of mass, and gyration tensors .
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