Skip to content
@TIO-IKIM

TIO-IKIM

Research Group of Translational Image-guided Oncology (TIO), Institute for Artificial Intelligence in Medicine (IKIM), Essen

Popular repositories Loading

  1. CellViT CellViT Public

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    Python 399 73

  2. CellViT-plus-plus CellViT-plus-plus Public

    Python 225 57

  3. medical_image_deidentification medical_image_deidentification Public

    De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy

    Python 34 7

  4. CLUE CLUE Public

    CLUE: A Clinical Language Understanding Evaluation for LLMs

    Python 24 5

  5. CellViT-Inference CellViT-Inference Public

    Python 17 5

  6. PathoPatcher PathoPatcher Public

    PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques with features like annotation handling, color normalization, …

    Python 13 9

Repositories

Showing 10 of 31 repositories
  • BiCC-Loss Public

    BiCC: an instance-aware loss for 3D medical image segmentation

    TIO-IKIM/BiCC-Loss's past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Sep 28, 2026
  • medical_image_deidentification Public

    De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy

    TIO-IKIM/medical_image_deidentification's past year of commit activity
    Python 34 7 0 0 Updated Sep 21, 2026
  • TIO-IKIM/Ventricle-Segmentation-Model's past year of commit activity
    Python 0 0 0 0 Updated Sep 19, 2026
  • shape-mi-demographics Public

    How much can organ shape alone reveal? Using 1,228 whole-body CTs (16 organs, intensity discarded), we predict sex (AUC 0.87), age (MAE 9.3 yr), and show shape is near-unique per person. Hip bones carry the strongest signal. Shape outperforms intensity for sex — the signal is geometric. Code + reproducible pipeline.

    TIO-IKIM/shape-mi-demographics's past year of commit activity
    Python 0 0 0 0 Updated Sep 14, 2026
  • shape-demographics-capi Public

    What does female pelvic organ shape encode? Uterine corpus shape predicts age (R²=0.14, size-dominated, not fibroids). Ovarian/uterine shape detects endometriomas within a site, but pooled cross-validation hides a site-label confound. Inter-rater analysis shows scale-free shape is more robust than size. Code + reproducible pipeline.

    TIO-IKIM/shape-demographics-capi's past year of commit activity
    Python 0 0 0 0 Updated Sep 8, 2026
  • STM Public
    TIO-IKIM/STM's past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 2, 2026
  • PhaseGen Public

    PhaseGen - Generate MRI raw data based on magnitudinal data

    TIO-IKIM/PhaseGen's past year of commit activity
    Python 12 2 0 0 Updated Jun 17, 2026
  • kspace-breast-seg Public

    Hybrid k-space-to-image deep learning for breast cancer lesion segmentation directly from acquired MRI k-space.

    TIO-IKIM/kspace-breast-seg's past year of commit activity
    Python 2 Apache-2.0 0 0 0 Updated May 21, 2026
  • AIANO Public
    TIO-IKIM/AIANO's past year of commit activity
    TypeScript 2 Apache-2.0 0 0 0 Updated May 7, 2026
  • TIO-IKIM/Learning-to-Look-Closer's past year of commit activity
    Python 4 Apache-2.0 2,513 0 0 Updated Apr 1, 2026

Top languages

Loading…

Most used topics

Loading…