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@Multiomics-Analytics-Group

Multi-omics Network Analytics Group

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  1. course_protein_language_modeling course_protein_language_modeling Public

    Jupyter Notebook 50 12

  2. vuegen vuegen Public

    VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply …

    Python 40

  3. MicW2Graph MicW2Graph Public

    A knowledge graph of the wastewater treatment microbiome and its biological context

    HTML 6

  4. prefer_ontology prefer_ontology Public

    A Precision Fermentation Ontology

    Makefile 6

  5. pubmed-rag pubmed-rag Public

    A playground for RAG development from pubmed API

    Jupyter Notebook 5 2

  6. course_multi-omics_data_science course_multi-omics_data_science Public

    Jupyter Notebook 5 1

Repositories

Showing 10 of 30 repositories
  • InstaNexus Public
    Multiomics-Analytics-Group/InstaNexus's past year of commit activity
    Python 1 MIT 3 5 2 Updated Oct 9, 2026
  • vuecore Public

    Python package for creating interactive and static visualizations of multi-omics data

    Multiomics-Analytics-Group/vuecore's past year of commit activity
    Python 4 0 7 2 Updated Oct 8, 2026
  • OrthoHPI2.0 Public

    Homology-derived predictions of host-parasite protein-protein interactions

    Multiomics-Analytics-Group/OrthoHPI2.0's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 8, 2026
  • acore Public

    Python package to preprocess and analyse multi-omics data

    Multiomics-Analytics-Group/acore's past year of commit activity
    Python 4 1 20 4 Updated Oct 8, 2026
  • gea Public

    Graph Explainable Attribution for decomposing GNNs embeddings using Sparse Autoencoders

    Multiomics-Analytics-Group/gea's past year of commit activity
    Python 2 MIT 0 3 0 Updated Oct 6, 2026
  • vuegen Public

    VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.

    Multiomics-Analytics-Group/vuegen's past year of commit activity
    Python 40 0 45 6 Updated Sep 23, 2026
  • prefer_ontology Public

    A Precision Fermentation Ontology

    Multiomics-Analytics-Group/prefer_ontology's past year of commit activity
    Makefile 6 CC-BY-4.0 0 27 (2 issues need help) 4 Updated Sep 9, 2026
  • course_multi-omics_analysis Public
    Multiomics-Analytics-Group/course_multi-omics_analysis's past year of commit activity
    Jupyter Notebook 1 Apache-2.0 0 0 0 Updated Sep 4, 2026
  • course_protein_language_modeling Public
    Multiomics-Analytics-Group/course_protein_language_modeling's past year of commit activity
    Jupyter Notebook 50 Apache-2.0 12 1 0 Updated Aug 20, 2026
  • nf-vuegen Public archive

    nf-core module designed to automate report generation from outputs produced by other modules, subworkflows, or pipelines. VueGen creates reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications.

    Multiomics-Analytics-Group/nf-vuegen's past year of commit activity
    Nextflow 4 MIT 0 0 1 Updated Aug 11, 2026
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