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11 changes: 11 additions & 0 deletions src/pyrecest/filters/candidate_mixture.py
Original file line number Diff line number Diff line change
Expand Up @@ -99,6 +99,17 @@ def __post_init__(self) -> None:
covariances = covariances.copy()
if not np.all(np.isfinite(covariances)):
raise ValueError("covariances must contain only finite values")
covariance_transposes = np.swapaxes(covariances, -1, -2)
covariance_scale = np.maximum(
np.maximum(np.abs(covariances), np.abs(covariance_transposes)), 1.0
)
with np.errstate(over="ignore", under="ignore", invalid="ignore"):
relative_asymmetry = np.abs(
covariances / covariance_scale
- covariance_transposes / covariance_scale
)
if np.any(relative_asymmetry > 1e-12):
raise ValueError("covariances must be symmetric")
covariances = np.stack([_symmetrize(value) for value in covariances])
try:
cholesky = np.linalg.cholesky(covariances)
Expand Down
48 changes: 48 additions & 0 deletions tests/filters/test_candidate_mixture_covariance_symmetry.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,48 @@
import unittest

import numpy as np
from pyrecest.filters.candidate_mixture import GaussianMixtureMeasurementFactor


class GaussianMixtureMeasurementCovarianceSymmetryTest(unittest.TestCase):
def test_rejects_nonsymmetric_shared_covariance(self):
nonsymmetric = np.array([[2.0, 1.0], [0.0, 2.0]])

with self.assertRaisesRegex(ValueError, "covariances must be symmetric"):
GaussianMixtureMeasurementFactor(
means=np.zeros((2, 2)),
covariances=nonsymmetric,
)

def test_rejects_nonsymmetric_component_covariance(self):
covariances = np.array(
[
np.eye(2),
[[2.0, 1.0], [0.0, 2.0]],
]
)

with self.assertRaisesRegex(ValueError, "covariances must be symmetric"):
GaussianMixtureMeasurementFactor(
means=np.zeros((2, 2)),
covariances=covariances,
)

def test_tolerates_roundoff_scale_asymmetry(self):
covariance = np.array([[2.0, 1.0 + 1e-13], [1.0, 2.0]])

factor = GaussianMixtureMeasurementFactor(
means=np.zeros((1, 2)),
covariances=covariance,
)

np.testing.assert_allclose(
factor.covariances[0],
0.5 * (covariance + covariance.T),
rtol=0.0,
atol=0.0,
)


if __name__ == "__main__":
unittest.main()
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