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get artifacts via /tmp #316

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Merged
daurer merged 1 commit into from
Aug 10, 2026
Merged

get artifacts via /tmp #316

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6 changes: 4 additions & 2 deletions i14/templates/xrf-tomo-template.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -219,6 +219,8 @@ spec:
--prepare-only

python -m jupyter nbconvert --to html --execute --output align_initial --output-dir $OUTPUT/_assets --embed-images $OUTPUT/align_initial.ipynb
cp -r $OUTPUT/_assets/* /tmp/

volumeMounts:
- name: session
mountPath: "{{`{{ workflow.parameters.prefix }}`}}/{{`{{ workflow.parameters.visitdir }}`}}"
Expand All @@ -231,11 +233,11 @@ spec:
path: "{{`{{ workflow.parameters.prefix }}`}}/{{`{{ workflow.parameters.visitdir }}`}}/processing/workflows/{{`{{ workflow.parameters.outputFolder }}`}}/{{`{{ workflow.parameters.elementToAlign }}`}}-{{`{{ workflow.parameters.transitionToAlign }}`}}_cor.txt"
artifacts:
- name: align_initial
path: "{{`{{ workflow.parameters.prefix }}`}}/{{`{{ workflow.parameters.visitdir }}`}}/processing/workflows/{{`{{ workflow.parameters.outputFolder }}`}}/_assets/align_initial.html"
path: "/tmp/align_initial.html"
archive:
none: {}
- name: aligned_stack
path: "{{`{{ workflow.parameters.prefix }}`}}/{{`{{ workflow.parameters.visitdir }}`}}/processing/workflows/{{`{{ workflow.parameters.outputFolder }}`}}/_assets/align_stack.gif"
path: "/tmp/align_stack.gif"
archive:
none: {}
podSpecPatch: |
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