Add diagram of modular experiments#162
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#134) * refactor: move low level diagrams from dynamic-foraging to dynamic_foraging * fix: clean up bad files
…, cache tables, and MCP (#69)
* Update index linking for outreach.md page * Update headers * Minor text edit
Fixes #126 also adds sphinx-copybutton extension
* Added readme about github backing of CO capsules --------- Co-authored-by: Doug Ollerenshaw <doug.ollerenshaw@alleninstitute.org>
* update pipeline versioning doc * move file and update links * minor glossary updates
* docs: calibration * docs: clarify archive practice * docs: move to the calibration file previously added * docs: typo * docs: rewrite calibration section * Update calibration.md
…ix typo (#159) * fix: expose full contents of error messages * fix: allow 400 responses for subject/procedures * docs: typo
* docs: rework the find data sections * docs: move data portal up * docs: typo * docs: generalize
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| The diagram describes how independent acquisition **platforms** are composed into a single **experiment** and carried through the AIND data pipeline. It follows the architecture proposed for the `Aind.Behavior.Services` framework (see *"Towards modular platforms and composable experiments"*). The example shown is a typical session combining **one behavior platform** (Behavior + Behavior Videos) with **two physiology platforms** (Fiber Photometry and Electrophysiology) acquired simultaneously. |
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(see "Towards modular platforms and composable experiments")
Should/can this refer to something accessible?
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Actually now that the acquisition architecture exists I shiuld drop the AIND.behavior.services mention. I think this is compatible with the instrument architecture, what do you think?
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This PR adds documentation on the initial proposal from 1.5 years ago on how modular experiments should be designed (this is the initial architecture designed for vr-foraging, but likely applicable for other platforms)
📚 Documentation preview 📚: https://scicomp-docs--162.org.readthedocs.build/en/162/