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Prepare 1.0.0 review candidate with pinned GNN and bound publication artifacts - #1

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docxology wants to merge 8 commits into
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prepare/1.0.0-review-20261026
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docxology wants to merge 8 commits into
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prepare/1.0.0-review-20261026

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@docxology docxology commented Oct 27, 2026 •

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Pins GNN interoperability to released v5.0.1 and its exact source commit, rejecting altered, missing, extra, replaced or hidden source inputs. The real parser runs in an isolated interpreter with a private bytecode prefix. Dashboard Ctrl-C now works with inherited ignored signals and across worker-start/completion races, each request permit is released once, and capture binding requires the exact checkout root. Unused compatibility exports and duplicated dated guidance are removed; measurement-bound adapters and necessary historical explanations remain.

Rebuilds the 1.0.0 PDF, HTML and link companions from audited source 7f1cb5f, checkpoint 34b7d2d. A bibliography comment that caused real BibTeX failure is repaired without changing citation entries; actual compiler logs and malformed-entry controls are checked. Availability text identifies Zenodo as an unpublished DOI reservation. Scientific ledger, models, corpora and formal inputs remain unchanged.

Validation:

  • Canonical portable profile: all ten steps passed, 9,671 tests passed, 43 skipped, clean and unchanged inputs at 34b7d2d. Hosted CI also passed its quick check on this exact commit; the PR is ready for review.
  • Current focused controls: 296 passed. Publication contracts: 375 passed.
  • Fresh independent audit: APPROVE as a truthful review candidate; all 173 current original page images individually opened and read, none unread. Independent execution retains 325 passes and three setup errors for an absent generated, ignored dashboard page; that command is not green. The canonical prepared-environment coverage is separate.
  • Current full profile: ten prerequisites passed, including pinned GNN source and reproducible wheel/sdist builds, then strict network-claim binding failed because a retained receipt lacks required run_scope. Later full steps did not run. Full/publication acceptance remains FALSE.
  • Earlier six portable failures and initial controls remain retained with their own source identities. The corrected candidate has a fresh review; old approvals are not transferred.

The flat source snapshot has exactly one commit, 94cc35c, with the identical tree as this PR. A normal offline bundle clone materializes all 739 files with matching hashes and passes fsck. The bound PDF has SHA256 43ceee4f3859c9103812db1373761c0783f8f99473ba8671846ff6b07408d847. The public portable manuscript ZIP contains all local protocol companions and its per-member hash manifest; an anonymous download matched its SHA-256 and all 103 content members. Keep its directory structure intact when following local PDF links.

Publication HOLD: resolve the strict receipt mismatch, locate the retained cache and reviewed derivative/raw-input prerequisites, and execute the remaining full gates before release acceptance. Nonblocking manuscript polish remains in TOC spacing, the cover DOI qualifier and sparse transitions. The existing main, v1.0.0 tag and older draft assets are preserved. No new hosted measurement or independent scientific replication is claimed. The Zenodo draft is preserved while ownership is reconciled after older assets appeared during preparation.

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docxology marked this pull request as ready for review October 27, 2026 04:06
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