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title={Efficient coalescent simulation and genealogical analysis for large sample sizes},
author={Kelleher, Jerome and Etheridge, Alison M and McVean, Gilean},
journal={PLoS computational biology},
volume={12},
number={5},
pages={e1004842},
year={2016},
publisher={Public Library of Science}
}
@InCollection{kelleher2020coalescent,
author={Kelleher, Jerome and Lohse, Konrad},
editor={Dutheil, Julien Y.},
title={Coalescent Simulation with msprime},
bookTitle={Statistical Population Genomics},
year={2020},
publisher={Springer US},
address={New York, NY},
pages={191--230},
}
@article{nelson2020accounting,
title={Accounting for long-range correlations in genome-wide simulations
of large cohorts},
author={Nelson, Dominic and Kelleher, Jerome and Ragsdale, Aaron P and
Moreau, Claudia and McVean, Gil and Gravel, Simon},
journal={PLoS genetics},
volume={16},
number={5},
pages={e1008619},
year={2020},
publisher={Public Library of Science San Francisco, CA USA}
}
@article{adrion2019community,
title={A community-maintained standard library of population genetic models},
author={Adrion, Jeffrey R and Cole, Christopher B and Dukler, Noah and Galloway, Jared G and Gladstein, Ariella L and Gower, Graham and Kyriazis, Christopher C and Ragsdale, Aaron P and Tsambos, Georgia and Baumdicker, Franz and others},