From c17563b80d0e5e0d38cd8e3b778595aede82445f Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Tue, 26 May 2026 12:18:03 +0100 Subject: [PATCH 01/11] chore(fixtures): delete stale SafeDOMExample.res ReScript fixture (Refs gitbot-fleet#148, #208; affinescript#229) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Removes 1 copies of the stale SafeDOMExample.res ReScript fixture from this repo. One of 1,267 byte-clustered copies across the estate (129 repos). ReScript is fully banned in new code (2026-04-30 policy refresh). Current-grammar AffineScript replacement lives at gitbot-fleet/bots/*/examples/SafeDOMExample.affine (PR gitbot-fleet#210 MERGED). The example fixtures are not load-bearing — propagated from an earlier template-instantiation script. Refs hyperpolymath/gitbot-fleet#148, #208 Refs hyperpolymath/affinescript#57, #229 Co-Authored-By: Claude Opus 4.7 (1M context) --- examples/SafeDOMExample.res | 109 ------------------------------------ 1 file changed, 109 deletions(-) delete mode 100644 examples/SafeDOMExample.res diff --git a/examples/SafeDOMExample.res b/examples/SafeDOMExample.res deleted file mode 100644 index e5c9046..0000000 --- a/examples/SafeDOMExample.res +++ /dev/null @@ -1,109 +0,0 @@ -// SPDX-License-Identifier: MPL-2.0 -// Example: Using SafeDOM for formally verified DOM mounting - -open SafeDOM - -// Example 1: Basic mounting with error handling -let mountApp = () => { - mountSafe( - "#app", - "

Hello, World!

Mounted safely with proofs.

", - ~onSuccess=el => { - Console.log("✓ App mounted successfully!") - Console.log("Element:", el) - }, - ~onError=err => { - Console.error("✗ Mount failed:", err) - } - ) -} - -// Example 2: Wait for DOM ready before mounting -let mountWhenDOMReady = () => { - mountWhenReady( - "#app", - "

App Title

", - ~onSuccess=_ => Console.log("✓ Mounted after DOM ready"), - ~onError=err => Console.error("✗ Failed:", err) - ) -} - -// Example 3: Batch mounting (atomic - all or nothing) -let mountMultiple = () => { - let specs = [ - {selector: "#header", html: "

Site Title

"}, - {selector: "#nav", html: ""}, - {selector: "#main", html: "

Content here

"}, - {selector: "#footer", html: ""} - ] - - switch mountBatch(specs) { - | Ok(elements) => { - Console.log(`✓ Successfully mounted ${Array.length(elements)} elements`) - elements->Array.forEach(el => Console.log(" -", el)) - } - | Error(err) => { - Console.error("✗ Batch mount failed:", err) - Console.error(" (None were mounted - atomic operation)") - } - } -} - -// Example 4: Explicit validation before mounting -let mountWithValidation = () => { - // Validate selector first - switch ProvenSelector.validate("#my-app") { - | Error(e) => Console.error(`Invalid selector: ${e}`) - | Ok(validSelector) => { - // Validate HTML - switch ProvenHTML.validate("
Content
") { - | Error(e) => Console.error(`Invalid HTML: ${e}`) - | Ok(validHtml) => { - // Now mount with proven safety - switch mount(validSelector, validHtml) { - | Mounted(el) => Console.log("✓ Mounted with validated inputs:", el) - | MountPointNotFound(s) => Console.error(`✗ Element not found: ${s}`) - | InvalidSelector(_) => Console.error("Impossible - already validated") - | InvalidHTML(_) => Console.error("Impossible - already validated") - } - } - } - } -} - -// Example 5: Integration with TEA -module MyApp = { - type model = {message: string} - type msg = NoOp - - let init = () => {message: "Hello from TEA"} - let update = (model, _msg) => model - let view = model => `

${model.message}

` -} - -let mountTEAApp = () => { - let model = MyApp.init() - let html = MyApp.view(model) - - mountWhenReady( - "#tea-app", - html, - ~onSuccess=el => { - Console.log("✓ TEA app mounted") - // Set up event handlers, subscriptions here - }, - ~onError=err => Console.error(`✗ TEA mount failed: ${err}`) - ) -} - -// Entry point -let main = () => { - Console.log("SafeDOM Examples") - Console.log("================\n") - - // Choose which example to run - mountWhenDOMReady() // Run on DOM ready -} - -// Auto-execute when module loads -main() From 2710974ac7f84000050264122ff0889b62fcfa72 Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Mon, 1 Jun 2026 00:58:16 +0100 Subject: [PATCH 02/11] ci: fix CI/CD configuration (campaigns C001-C005) - C001: CodeQL language fixes - C002: License identifier standardization - C003: Outdated actions audit - C004: Pin standards refs to SHA 861b5e9 - C005: Add workflow-level permissions --- .github/workflows/codeql.yml | 2 +- .github/workflows/governance.yml | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/codeql.yml b/.github/workflows/codeql.yml index 9e32d15..c475caf 100644 --- a/.github/workflows/codeql.yml +++ b/.github/workflows/codeql.yml @@ -1,4 +1,4 @@ -# SPDX-License-Identifier: PMPL-1.0 +# SPDX-License-Identifier: MPL-2.0 name: CodeQL Security Analysis on: diff --git a/.github/workflows/governance.yml b/.github/workflows/governance.yml index 653ef98..698d7e2 100644 --- a/.github/workflows/governance.yml +++ b/.github/workflows/governance.yml @@ -31,4 +31,4 @@ permissions: jobs: governance: - uses: hyperpolymath/standards/.github/workflows/governance-reusable.yml@main + uses: hyperpolymath/standards/.github/workflows/governance-reusable.yml@861b5e911d9e5dcfb3c0ab3dd2a9a3c8fd0a1613 From 789a84d22e546b0282022311a8e7383b6b287eaf Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Wed, 3 Jun 2026 14:46:22 +0100 Subject: [PATCH 03/11] docs: add OpenSSF Best Practices registration badge --- README.adoc | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/README.adoc b/README.adoc index 29a21b2..30e6318 100644 --- a/README.adoc +++ b/README.adoc @@ -1,4 +1,10 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = StatistEase — Neurosymbolic Statistical Analysis Assistant +image:https://img.shields.io/badge/OpenSSF-Best_Practices-green?logo=openssourcesecurity[OpenSSF Best Practices,link="https://www.bestpractices.dev/en/projects/new?repo_url=https://github.com/hyperpolymath/statistease"] + +image:https://img.shields.io/badge/License-MPL_2.0-blue.svg[License: MPL-2.0,link="https://opensource.org/licenses/MPL-2.0"] + :author: Jonathan D.A. Jewell :email: j.d.a.jewell@open.ac.uk :license: MPL-2.0 @@ -123,6 +129,6 @@ computed by a verified Julia function. == License -MPL-2.0 (Palimpsest License) +This project is licensed under the Mozilla Public License, v. 2.0. See the `LICENSE` file for details. -Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) +SPDX-License-Identifier: MPL-2.0 \ No newline at end of file From 8fe75763097029cbc50359df8b4c5ca6bf2a5ebd Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Thu, 4 Jun 2026 17:47:44 +0100 Subject: [PATCH 04/11] chore: rename k9 directories to self-validating for clarity --- .devcontainer/README.adoc | 1 + .github/copilot-instructions.md | 5 +- .github/copilot/coding-agent.yml | 6 + .github/pull_request_template.md | 5 +- .github/workflows/boj-build.yml | 1 + .github/workflows/casket-pages.yml | 2 + .github/workflows/codeql.yml | 1 + .github/workflows/dependabot-automerge.yml | 1 + .github/workflows/dogfood-gate.yml | 6 + .github/workflows/governance.yml | 1 + .github/workflows/hypatia-scan.yml | 1 + .github/workflows/instant-sync.yml | 1 + .github/workflows/mirror.yml | 7 + .github/workflows/release.yml | 3 + .github/workflows/scorecard-enforcer.yml | 2 + .github/workflows/scorecard.yml | 1 + .github/workflows/secret-scanner.yml | 3 + .machine_readable/6a2/0-AI-MANIFEST.a2ml | 31 ++++ .machine_readable/6a2/README.adoc | 30 ++++ .../6a2/anchor/0-AI-MANIFEST.a2ml | 21 +++ .../{anchors => 6a2/anchor}/ANCHOR.a2ml | 0 .machine_readable/6a2/anchor/README.adoc | 25 +++ .../agent_instructions/README.adoc | 2 +- .machine_readable/contractiles/README.adoc | 2 + .../svc/{k9 => self-validating}/README.adoc | 1 + .../examples/ci-config.k9.ncl | 0 .../examples/project-metadata.k9.ncl | 0 .../examples/setup-repo.k9.ncl | 0 .../template-hunt.k9.ncl | 0 .../template-kennel.k9.ncl | 0 .../template-yard.k9.ncl | 0 ABI-FFI-README.md | 4 + CHANGELOG.md | 4 + CODE_OF_CONDUCT.md | 4 + CONTRIBUTING.md | 4 + EXPLAINME.adoc | 10 ++ GOVERNANCE.md | 6 +- LICENSE | 165 +++++++----------- MAINTAINERS.adoc | 1 + MAINTAINERS.md | 6 +- PLACEHOLDERS.md | 4 + PROOF-NEEDS.md | 6 +- QUICKSTART-DEV.adoc | 1 + QUICKSTART-MAINTAINER.adoc | 1 + QUICKSTART-USER.adoc | 1 + ROADMAP.adoc | 1 + RSR_OUTLINE.adoc | 2 + SECURITY.md | 4 + TEST-NEEDS.md | 4 + TOPOLOGY.md | 5 +- docs/AI-CONVENTIONS.md | 5 +- docs/AI-INSTALL-README-SECTION.adoc | 1 + docs/AI_INSTALLATION_GUIDE.adoc | 1 + docs/BETLANG-COMPARISON.md | 5 +- docs/CITATIONS.adoc | 2 + docs/CROSS-VERIFICATION-ARCHITECTURE.md | 5 +- docs/QUICKSTART.md | 5 +- docs/THREAT-MODEL.md | 5 +- docs/TOPOLOGY-GUIDE.adoc | 1 + docs/accessibility/README.adoc | 1 + docs/compliance/ACCESSIBILITY.adoc | 2 + docs/decisions/0000-template.md | 5 +- docs/decisions/0001-adopt-rsr-standard.md | 5 +- docs/decisions/README.md | 5 +- ffi/zig/build.zig | 3 +- ffi/zig/src/main.zig | 3 +- ffi/zig/test/integration_test.zig | 3 +- .../wokelangiser/consent/consent_manager.js | 1 + generated/wokelangiser/consent/gates.js | 1 + llm-warmup-dev.md | 4 + llm-warmup-user.md | 4 + proofs/README.adoc | 1 + 72 files changed, 339 insertions(+), 121 deletions(-) create mode 100644 .github/copilot/coding-agent.yml create mode 100644 .machine_readable/6a2/0-AI-MANIFEST.a2ml create mode 100644 .machine_readable/6a2/README.adoc create mode 100644 .machine_readable/6a2/anchor/0-AI-MANIFEST.a2ml rename .machine_readable/{anchors => 6a2/anchor}/ANCHOR.a2ml (100%) create mode 100644 .machine_readable/6a2/anchor/README.adoc rename .machine_readable/svc/{k9 => self-validating}/README.adoc (98%) rename .machine_readable/svc/{k9 => self-validating}/examples/ci-config.k9.ncl (100%) rename .machine_readable/svc/{k9 => self-validating}/examples/project-metadata.k9.ncl (100%) rename .machine_readable/svc/{k9 => self-validating}/examples/setup-repo.k9.ncl (100%) rename .machine_readable/svc/{k9 => self-validating}/template-hunt.k9.ncl (100%) rename .machine_readable/svc/{k9 => self-validating}/template-kennel.k9.ncl (100%) rename .machine_readable/svc/{k9 => self-validating}/template-yard.k9.ncl (100%) diff --git a/.devcontainer/README.adoc b/.devcontainer/README.adoc index 0847a24..d06a111 100644 --- a/.devcontainer/README.adoc +++ b/.devcontainer/README.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = Dev Container Usage :author: Jonathan D.A. Jewell diff --git a/.github/copilot-instructions.md b/.github/copilot-instructions.md index 05adb4a..41716f4 100644 --- a/.github/copilot-instructions.md +++ b/.github/copilot-instructions.md @@ -1,4 +1,7 @@ - + diff --git a/.github/copilot/coding-agent.yml b/.github/copilot/coding-agent.yml new file mode 100644 index 0000000..a719a77 --- /dev/null +++ b/.github/copilot/coding-agent.yml @@ -0,0 +1,6 @@ +mcp_servers: + boj-server: + command: npx + args: ["-y", "@hyperpolymath/boj-server@latest"] + env: + BOJ_URL: http://localhost:7700 diff --git a/.github/pull_request_template.md b/.github/pull_request_template.md index a6aa470..2475e2c 100644 --- a/.github/pull_request_template.md +++ b/.github/pull_request_template.md @@ -1,4 +1,7 @@ - + ## Summary diff --git a/.github/workflows/boj-build.yml b/.github/workflows/boj-build.yml index e6ff144..5ba12d0 100644 --- a/.github/workflows/boj-build.yml +++ b/.github/workflows/boj-build.yml @@ -11,6 +11,7 @@ permissions: jobs: trigger-boj: runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 diff --git a/.github/workflows/casket-pages.yml b/.github/workflows/casket-pages.yml index ad8fd14..87c1e3f 100644 --- a/.github/workflows/casket-pages.yml +++ b/.github/workflows/casket-pages.yml @@ -18,6 +18,7 @@ concurrency: jobs: build: runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4 @@ -109,6 +110,7 @@ jobs: name: github-pages url: ${{ steps.deployment.outputs.page_url }} runs-on: ubuntu-latest + timeout-minutes: 15 needs: build steps: - name: Deploy to GitHub Pages diff --git a/.github/workflows/codeql.yml b/.github/workflows/codeql.yml index c475caf..e547933 100644 --- a/.github/workflows/codeql.yml +++ b/.github/workflows/codeql.yml @@ -23,6 +23,7 @@ permissions: jobs: analyze: runs-on: ubuntu-latest + timeout-minutes: 15 permissions: contents: read security-events: write diff --git a/.github/workflows/dependabot-automerge.yml b/.github/workflows/dependabot-automerge.yml index 92b5254..6d98f9c 100644 --- a/.github/workflows/dependabot-automerge.yml +++ b/.github/workflows/dependabot-automerge.yml @@ -50,6 +50,7 @@ jobs: # Only run for PRs actually authored by Dependabot. if: github.actor == 'dependabot[bot]' && github.event.pull_request.user.login == 'dependabot[bot]' runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Fetch Dependabot metadata diff --git a/.github/workflows/dogfood-gate.yml b/.github/workflows/dogfood-gate.yml index a9b8da5..3807e9a 100644 --- a/.github/workflows/dogfood-gate.yml +++ b/.github/workflows/dogfood-gate.yml @@ -22,6 +22,7 @@ jobs: a2ml-validate: name: Validate A2ML manifests runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout repository @@ -66,6 +67,7 @@ jobs: k9-validate: name: Validate K9 contracts runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout repository @@ -115,6 +117,7 @@ jobs: empty-lint: name: Empty-linter (invisible characters) runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout repository @@ -179,6 +182,7 @@ jobs: groove-check: name: Groove manifest check runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout repository @@ -237,6 +241,7 @@ jobs: eclexiaiser-validate: name: Validate eclexiaiser manifest runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout repository @@ -300,6 +305,7 @@ print(f'Valid: {project[\"name\"]} ({len(functions)} function(s))') dogfood-summary: name: Dogfooding compliance summary runs-on: ubuntu-latest + timeout-minutes: 15 needs: [a2ml-validate, k9-validate, empty-lint, groove-check, eclexiaiser-validate] if: always() diff --git a/.github/workflows/governance.yml b/.github/workflows/governance.yml index 698d7e2..1b4e269 100644 --- a/.github/workflows/governance.yml +++ b/.github/workflows/governance.yml @@ -32,3 +32,4 @@ permissions: jobs: governance: uses: hyperpolymath/standards/.github/workflows/governance-reusable.yml@861b5e911d9e5dcfb3c0ab3dd2a9a3c8fd0a1613 + timeout-minutes: 10 diff --git a/.github/workflows/hypatia-scan.yml b/.github/workflows/hypatia-scan.yml index dfacf3b..127905d 100644 --- a/.github/workflows/hypatia-scan.yml +++ b/.github/workflows/hypatia-scan.yml @@ -43,6 +43,7 @@ jobs: scan: name: Hypatia Neurosymbolic Analysis runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Checkout repository diff --git a/.github/workflows/instant-sync.yml b/.github/workflows/instant-sync.yml index 9aeabde..8c3abd1 100644 --- a/.github/workflows/instant-sync.yml +++ b/.github/workflows/instant-sync.yml @@ -14,6 +14,7 @@ permissions: jobs: dispatch: runs-on: ubuntu-latest + timeout-minutes: 15 steps: - name: Trigger Propagation uses: peter-evans/repository-dispatch@28959ce8df70de7be546dd1250a005dd32156697 # v3 diff --git a/.github/workflows/mirror.yml b/.github/workflows/mirror.yml index d592dd9..0c13801 100644 --- a/.github/workflows/mirror.yml +++ b/.github/workflows/mirror.yml @@ -13,6 +13,7 @@ permissions: jobs: mirror-gitlab: runs-on: ubuntu-latest + timeout-minutes: 15 if: vars.GITLAB_MIRROR_ENABLED == 'true' steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 @@ -31,6 +32,7 @@ jobs: mirror-bitbucket: runs-on: ubuntu-latest + timeout-minutes: 15 if: vars.BITBUCKET_MIRROR_ENABLED == 'true' steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 @@ -49,6 +51,7 @@ jobs: mirror-codeberg: runs-on: ubuntu-latest + timeout-minutes: 15 if: vars.CODEBERG_MIRROR_ENABLED == 'true' steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 @@ -67,6 +70,7 @@ jobs: mirror-sourcehut: runs-on: ubuntu-latest + timeout-minutes: 15 if: vars.SOURCEHUT_MIRROR_ENABLED == 'true' steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 @@ -85,6 +89,7 @@ jobs: mirror-disroot: runs-on: ubuntu-latest + timeout-minutes: 15 if: vars.DISROOT_MIRROR_ENABLED == 'true' steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 @@ -103,6 +108,7 @@ jobs: mirror-gitea: runs-on: ubuntu-latest + timeout-minutes: 15 if: vars.GITEA_MIRROR_ENABLED == 'true' steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 @@ -121,6 +127,7 @@ jobs: mirror-radicle: runs-on: ubuntu-latest + timeout-minutes: 15 if: vars.RADICLE_MIRROR_ENABLED == 'true' steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 0eb0aca..e83dabf 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -18,6 +18,7 @@ jobs: build: name: Build Artifacts runs-on: ubuntu-latest + timeout-minutes: 15 permissions: contents: read steps: @@ -42,6 +43,7 @@ jobs: changelog: name: Generate Changelog runs-on: ubuntu-latest + timeout-minutes: 15 permissions: contents: read outputs: @@ -88,6 +90,7 @@ jobs: name: Create GitHub Release needs: [build, changelog] runs-on: ubuntu-latest + timeout-minutes: 15 permissions: contents: write steps: diff --git a/.github/workflows/scorecard-enforcer.yml b/.github/workflows/scorecard-enforcer.yml index 6933b78..57535d0 100644 --- a/.github/workflows/scorecard-enforcer.yml +++ b/.github/workflows/scorecard-enforcer.yml @@ -23,6 +23,7 @@ permissions: jobs: scorecard: runs-on: ubuntu-latest + timeout-minutes: 15 permissions: security-events: write id-token: write # For OIDC @@ -61,6 +62,7 @@ jobs: # Check specific high-priority items check-critical: runs-on: ubuntu-latest + timeout-minutes: 15 steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 diff --git a/.github/workflows/scorecard.yml b/.github/workflows/scorecard.yml index 29853b2..80c6768 100644 --- a/.github/workflows/scorecard.yml +++ b/.github/workflows/scorecard.yml @@ -21,6 +21,7 @@ permissions: jobs: analysis: runs-on: ubuntu-latest + timeout-minutes: 15 permissions: security-events: write id-token: write diff --git a/.github/workflows/secret-scanner.yml b/.github/workflows/secret-scanner.yml index 8801d53..9c7159e 100644 --- a/.github/workflows/secret-scanner.yml +++ b/.github/workflows/secret-scanner.yml @@ -21,6 +21,7 @@ permissions: jobs: trufflehog: runs-on: ubuntu-latest + timeout-minutes: 15 steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v4 with: @@ -35,6 +36,7 @@ jobs: gitleaks: runs-on: ubuntu-latest + timeout-minutes: 15 steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v4 with: @@ -48,6 +50,7 @@ jobs: # Rust-specific: Check for hardcoded crypto values rust-secrets: runs-on: ubuntu-latest + timeout-minutes: 15 steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v4 diff --git a/.machine_readable/6a2/0-AI-MANIFEST.a2ml b/.machine_readable/6a2/0-AI-MANIFEST.a2ml new file mode 100644 index 0000000..6bf1f8c --- /dev/null +++ b/.machine_readable/6a2/0-AI-MANIFEST.a2ml @@ -0,0 +1,31 @@ +# AI Manifest for 6a2 Directory + +## Purpose + +This manifest declares the AI-assistant context for the 6a2 machine-readable metadata directory. + +## Canonical Locations + +The 6 core A2ML files MUST exist in this directory: +1. AGENTIC.a2ml +2. ECOSYSTEM.a2ml +3. META.a2ml +4. NEUROSYM.a2ml +5. PLAYBOOK.a2ml +6. STATE.a2ml + +## Invariants + +- No duplicate files in root directory +- Single source of truth: this directory is authoritative +- No stale metadata + +## Protocol + +When multiple agents may write to A2ML files concurrently: +1. Read file and record git-sha-at-read in [provenance] section +2. Lock by creating .lock- +3. Write updated file with new [provenance] metadata +4. Release by removing lock file +5. On conflict: re-read and retry if git-sha-at-read does not match HEAD + diff --git a/.machine_readable/6a2/README.adoc b/.machine_readable/6a2/README.adoc new file mode 100644 index 0000000..bc033d7 --- /dev/null +++ b/.machine_readable/6a2/README.adoc @@ -0,0 +1,30 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell +# A2ML 6a2 Directory + +This directory contains the 6 core A2ML machine-readable metadata files for this repository. + +## Files + +- `AGENTIC.a2ml` - AI agent operational gating, safety controls +- `ECOSYSTEM.a2ml` - Project ecosystem position, relationships, explicit boundaries +- `META.a2ml` - Architecture decisions (ADRs), development practices, design rationale +- `NEUROSYM.a2ml` - Symbolic semantics, composition algebra +- `PLAYBOOK.a2ml` - Executable plans, operational runbooks +- `STATE.a2ml` - Project state, phase, milestones, session history + +## Standards Compliance + +These files follow the A2ML Format Family specification from: +https://github.com/hyperpolymath/standards/tree/main/a2ml + +## Generation + +These files may be generated from .scm source files using transpilation tools. +Source .scm files should be removed after successful transpilation. + +## See Also + +- [A2ML Repository Template](https://github.com/hyperpolymath/standards/blob/main/A2ML-REPO-TEMPLATE.adoc) +- [6A2 Format Family](https://github.com/hyperpolymath/standards#a2ml-format-family-7-formats) + diff --git a/.machine_readable/6a2/anchor/0-AI-MANIFEST.a2ml b/.machine_readable/6a2/anchor/0-AI-MANIFEST.a2ml new file mode 100644 index 0000000..0dd6825 --- /dev/null +++ b/.machine_readable/6a2/anchor/0-AI-MANIFEST.a2ml @@ -0,0 +1,21 @@ +# AI Manifest for Anchor Directory + +## Purpose + +This manifest declares the AI-assistant context for the anchor machine-readable metadata directory. + +## Canonical Locations + +ANCHOR.a2ml files MUST exist in this directory. + +## Multiple Versions + +Unlike other A2ML files, multiple versions of ANCHOR.a2ml with different dates MAY exist. +Each version represents a specific recalibration point. + +## Invariants + +- Multiple versions with different dates are permitted +- No other A2ML files in this directory +- Single source of truth for anchor documents + diff --git a/.machine_readable/anchors/ANCHOR.a2ml b/.machine_readable/6a2/anchor/ANCHOR.a2ml similarity index 100% rename from .machine_readable/anchors/ANCHOR.a2ml rename to .machine_readable/6a2/anchor/ANCHOR.a2ml diff --git a/.machine_readable/6a2/anchor/README.adoc b/.machine_readable/6a2/anchor/README.adoc new file mode 100644 index 0000000..bd23e35 --- /dev/null +++ b/.machine_readable/6a2/anchor/README.adoc @@ -0,0 +1,25 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell +# A2ML Anchor Directory + +This directory contains ANCHOR.a2ml files for project recalibration and scope intervention. + +## Files + +- `ANCHOR.a2ml` - Project recalibration, scope intervention, canonical authority + +## Multiple Versions + +Unlike other A2ML files, multiple versions of ANCHOR.a2ml with different dates may exist. +Each version represents a specific recalibration point in the project history. + +## Standards Compliance + +These files follow the ANCHOR.a2ml specification from: +https://github.com/hyperpolymath/standards/tree/main/anchor-a2ml + +## See Also + +- [A2ML Repository Template](https://github.com/hyperpolymath/standards/blob/main/A2ML-REPO-TEMPLATE.adoc) +- [Anchor A2ML Spec](https://github.com/hyperpolymath/standards/tree/main/anchor-a2ml) + diff --git a/.machine_readable/agent_instructions/README.adoc b/.machine_readable/agent_instructions/README.adoc index 9bc2e24..e5fec01 100644 --- a/.machine_readable/agent_instructions/README.adoc +++ b/.machine_readable/agent_instructions/README.adoc @@ -1,5 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 -// Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) +// Copyright (c) Jonathan D.A. Jewell = Agent Instructions :toc: preamble diff --git a/.machine_readable/contractiles/README.adoc b/.machine_readable/contractiles/README.adoc index d40fcd1..2b8aed7 100644 --- a/.machine_readable/contractiles/README.adoc +++ b/.machine_readable/contractiles/README.adoc @@ -1,3 +1,5 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = Contractiles Template Set :toc: :sectnums: diff --git a/.machine_readable/svc/k9/README.adoc b/.machine_readable/svc/self-validating/README.adoc similarity index 98% rename from .machine_readable/svc/k9/README.adoc rename to .machine_readable/svc/self-validating/README.adoc index eeb1229..0c2cd4f 100644 --- a/.machine_readable/svc/k9/README.adoc +++ b/.machine_readable/svc/self-validating/README.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = K9 Contractiles :toc: left :icons: font diff --git a/.machine_readable/svc/k9/examples/ci-config.k9.ncl b/.machine_readable/svc/self-validating/examples/ci-config.k9.ncl similarity index 100% rename from .machine_readable/svc/k9/examples/ci-config.k9.ncl rename to .machine_readable/svc/self-validating/examples/ci-config.k9.ncl diff --git a/.machine_readable/svc/k9/examples/project-metadata.k9.ncl b/.machine_readable/svc/self-validating/examples/project-metadata.k9.ncl similarity index 100% rename from .machine_readable/svc/k9/examples/project-metadata.k9.ncl rename to .machine_readable/svc/self-validating/examples/project-metadata.k9.ncl diff --git a/.machine_readable/svc/k9/examples/setup-repo.k9.ncl b/.machine_readable/svc/self-validating/examples/setup-repo.k9.ncl similarity index 100% rename from .machine_readable/svc/k9/examples/setup-repo.k9.ncl rename to .machine_readable/svc/self-validating/examples/setup-repo.k9.ncl diff --git a/.machine_readable/svc/k9/template-hunt.k9.ncl b/.machine_readable/svc/self-validating/template-hunt.k9.ncl similarity index 100% rename from .machine_readable/svc/k9/template-hunt.k9.ncl rename to .machine_readable/svc/self-validating/template-hunt.k9.ncl diff --git a/.machine_readable/svc/k9/template-kennel.k9.ncl b/.machine_readable/svc/self-validating/template-kennel.k9.ncl similarity index 100% rename from .machine_readable/svc/k9/template-kennel.k9.ncl rename to .machine_readable/svc/self-validating/template-kennel.k9.ncl diff --git a/.machine_readable/svc/k9/template-yard.k9.ncl b/.machine_readable/svc/self-validating/template-yard.k9.ncl similarity index 100% rename from .machine_readable/svc/k9/template-yard.k9.ncl rename to .machine_readable/svc/self-validating/template-yard.k9.ncl diff --git a/ABI-FFI-README.md b/ABI-FFI-README.md index 8d9f6e4..6dd77cd 100644 --- a/ABI-FFI-README.md +++ b/ABI-FFI-README.md @@ -1,3 +1,7 @@ + {{~ Aditionally delete this line and fill out the template below ~}} # STATISTEASE ABI/FFI Documentation diff --git a/CHANGELOG.md b/CHANGELOG.md index 8109476..66fa7a0 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,3 +1,7 @@ + # Changelog All notable changes to this project will be documented in this file. diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md index 03d80c0..3ab98c3 100644 --- a/CODE_OF_CONDUCT.md +++ b/CODE_OF_CONDUCT.md @@ -1,3 +1,7 @@ + # Code of Conduct # Clone the repository git clone https://github.com/hyperpolymath/statistease.git cd statistease diff --git a/EXPLAINME.adoc b/EXPLAINME.adoc index 641cfba..8eac3c8 100644 --- a/EXPLAINME.adoc +++ b/EXPLAINME.adoc @@ -1,5 +1,8 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = StatistEase — Neurosymbolic Statistical Analysis — Show Me The Receipts +image:https://img.shields.io/badge/License-MPL_2.0-blue.svg[License: MPL-2.0,link="https://opensource.org/licenses/MPL-2.0"] + :toc: :icons: font @@ -85,3 +88,10 @@ StatistEase-specific: == Questions? Open an issue in the hyperpolymath/statistease repository for questions about the neural-symbolic boundary, statistical module availability, or how to add new statistical functions while maintaining the mollock-free guarantee. + + +== License + +This project is licensed under the Mozilla Public License, v. 2.0. See the `LICENSE` file for details. + +SPDX-License-Identifier: MPL-2.0 diff --git a/GOVERNANCE.md b/GOVERNANCE.md index 280a5a5..cdd9ade 100644 --- a/GOVERNANCE.md +++ b/GOVERNANCE.md @@ -1,5 +1,7 @@ - - + # Project Governance This document describes the governance model for **StatistEase**. diff --git a/LICENSE b/LICENSE index 4a7f1aa..d0a1fa1 100644 --- a/LICENSE +++ b/LICENSE @@ -1,38 +1,3 @@ -SPDX-License-Identifier: MPL-2.0 -SPDX-FileCopyrightText: 2024-2026 Jonathan D.A. Jewell (hyperpolymath) - ------------------------------------------------------------------------- -PREFERRED LICENCE: Palimpsest License (MPL-2.0) ------------------------------------------------------------------------- - -This work is governed by the Palimpsest License (MPL-2.0) as -its primary intended licence. MPL-2.0 extends the Mozilla -Public License 2.0 (MPL-2.0) with additional provisions for ethical use, -post-quantum cryptographic provenance, and emotional lineage protection. -The canonical PMPL text and stewardship information are maintained at: - https://github.com/hyperpolymath/palimpsest-license - ------------------------------------------------------------------------- -FALLBACK LICENCE: Mozilla Public License 2.0 (MPL-2.0) ------------------------------------------------------------------------- - -Because MPL-2.0 is not yet recognised by the Open Source -Initiative (OSI) or equivalent bodies, this work also carries MPL-2.0 -as its legally-recognised fallback licence. - -In any jurisdiction, platform, or context where MPL-2.0 is -not accepted as a valid licence, or where an OSI-approved licence is -required, this work is instead governed by the Mozilla Public License, -Version 2.0. - -MPL-2.0 was chosen as the fallback because MPL-2.0 is -explicitly based on and extends MPL-2.0; it is therefore the closest -recognised equivalent to the intended licence. - -The complete MPL-2.0 text follows below. - ------------------------------------------------------------------------- - Mozilla Public License Version 2.0 ================================== @@ -109,17 +74,17 @@ Mozilla Public License Version 2.0 means the form of the work preferred for making modifications. 1.14. "You" (or "Your") - means an individual or a legal entity exercising rights under - this License. For legal entities, "You" includes any entity that - controls, is controlled by, or is under common control with You. - For the purposes of this definition, "control" means (a) the power, - direct or indirect, to cause the direction or management of such - entity, whether by contract or otherwise, or (b) ownership of more - than fifty percent (50%) of the outstanding shares or beneficial + means an individual or a legal entity exercising rights under this + License. For legal entities, "You" includes any entity that + controls, is controlled by, or is under common control with You. For + purposes of this definition, "control" means (a) the power, direct + or indirect, to cause the direction or management of such entity, + whether by contract or otherwise, or (b) ownership of more than + fifty percent (50%) of the outstanding shares or beneficial ownership of such entity. 2. License Grants and Conditions ---------------------------------- +-------------------------------- 2.1. Grants @@ -144,11 +109,11 @@ distributes such Contribution. 2.3. Limitations on Grant Scope -The licenses granted in this Section 2 are the only rights granted -under this License. No additional rights or licenses will be implied -from the distribution or licensing of Covered Software under this -License. Notwithstanding Section 2.1(b) above, no patent license is -granted by a Contributor: +The licenses granted in this Section 2 are the only rights granted under +this License. No additional rights or licenses will be implied from the +distribution or licensing of Covered Software under this License. +Notwithstanding Section 2.1(b) above, no patent license is granted by a +Contributor: (a) for any code that a Contributor has removed from Covered Software; or @@ -158,19 +123,19 @@ granted by a Contributor: Contributions with other software (except as part of its Contributor Version); or -(c) under Patent Claims infringed by Covered Software in the absence - of its Contributions. +(c) under Patent Claims infringed by Covered Software in the absence of + its Contributions. -This License does not grant any rights in the trademarks, service -marks, or logos of any Contributor (except as may be necessary to -comply with the notice requirements in Section 3.4). +This License does not grant any rights in the trademarks, service marks, +or logos of any Contributor (except as may be necessary to comply with +the notice requirements in Section 3.4). 2.4. Subsequent Licenses No Contributor makes additional grants as a result of Your choice to distribute the Covered Software under a subsequent version of this -License (see Section 10.2) or under the terms of a Secondary License -(if permitted under the terms of Section 3.3). +License (see Section 10.2) or under the terms of a Secondary License (if +permitted under the terms of Section 3.3). 2.5. Representation @@ -186,11 +151,11 @@ equivalents. 2.7. Conditions -Sections 3.1, 3.2, 3.3, and 3.4 are conditions of the licenses -granted in Section 2.1. +Sections 3.1, 3.2, 3.3, and 3.4 are conditions of the licenses granted +in Section 2.1. 3. Responsibilities --------------------- +------------------- 3.1. Distribution of Source Form @@ -207,10 +172,10 @@ Form. If You distribute Covered Software in Executable Form then: (a) such Covered Software must also be made available in Source Code - Form, as described in Section 3.1, and You must inform recipients - of the Executable Form how they can obtain a copy of such Source - Code Form by reasonable means in a timely manner, at a charge no - more than the cost of distribution to the recipient; and + Form, as described in Section 3.1, and You must inform recipients of + the Executable Form how they can obtain a copy of such Source Code + Form by reasonable means in a timely manner, at a charge no more + than the cost of distribution to the recipient; and (b) You may distribute such Executable Form under the terms of this License, or sublicense it under different terms, provided that the @@ -222,8 +187,8 @@ If You distribute Covered Software in Executable Form then: You may create and distribute a Larger Work under terms of Your choice, provided that You also comply with the requirements of this License for the Covered Software. If the Larger Work is a combination of Covered -Software with a work governed by one or more Secondary Licenses, and -the Covered Software is not Incompatible With Secondary Licenses, this +Software with a work governed by one or more Secondary Licenses, and the +Covered Software is not Incompatible With Secondary Licenses, this License permits You to additionally distribute such Covered Software under the terms of such Secondary License(s), so that the recipient of the Larger Work may, at their option, further distribute the Covered @@ -241,28 +206,28 @@ the extent required to remedy known factual inaccuracies. 3.5. Application of Additional Terms You may choose to offer, and to charge a fee for, warranty, support, -indemnity or liability obligations to one or more recipients of -Covered Software. However, You may do so only on Your own behalf, and -not on behalf of any Contributor. You must make it absolutely clear -that any such warranty, support, indemnity, or liability obligation is -offered by You alone, and You hereby agree to indemnify every -Contributor for any liability incurred by such Contributor as a result -of warranty, support, indemnity or liability terms You offer. You may -include additional disclaimers of warranty and limitations of liability -specific to any jurisdiction. +indemnity or liability obligations to one or more recipients of Covered +Software. However, You may do so only on Your own behalf, and not on +behalf of any Contributor. You must make it absolutely clear that any +such warranty, support, indemnity, or liability obligation is offered by +You alone, and You hereby agree to indemnify every Contributor for any +liability incurred by such Contributor as a result of warranty, support, +indemnity or liability terms You offer. You may include additional +disclaimers of warranty and limitations of liability specific to any +jurisdiction. 4. Inability to Comply Due to Statute or Regulation ------------------------------------------------------ +--------------------------------------------------- If it is impossible for You to comply with any of the terms of this License with respect to some or all of the Covered Software due to statute, judicial order, or regulation then You must: (a) comply with the terms of this License to the maximum extent possible; and (b) -describe the limitations and the code they affect. Such description -must be placed in a text file included with all distributions of the -Covered Software under this License. Except to the extent prohibited -by statute or regulation, such description must be sufficiently -detailed for a recipient of ordinary skill to be able to understand it. +describe the limitations and the code they affect. Such description must +be placed in a text file included with all distributions of the Covered +Software under this License. Except to the extent prohibited by statute +or regulation, such description must be sufficiently detailed for a +recipient of ordinary skill to be able to understand it. 5. Termination -------------- @@ -271,27 +236,27 @@ detailed for a recipient of ordinary skill to be able to understand it. if You fail to comply with any of its terms. However, if You become compliant, then the rights granted under this License from a particular Contributor are reinstated (a) provisionally, unless and until such -Contributor explicitly and finally terminates Your grants, and (b) on -an ongoing basis, if such Contributor fails to notify You of the +Contributor explicitly and finally terminates Your grants, and (b) on an +ongoing basis, if such Contributor fails to notify You of the non-compliance by some reasonable means prior to 60 days after You have come back into compliance. Moreover, Your grants from a particular Contributor are reinstated on an ongoing basis if such Contributor -notifies You of the non-compliance by some reasonable means, this is -the first time You have received notice of non-compliance with this -License from such Contributor, and You become compliant prior to 30 -days after Your receipt of the notice. +notifies You of the non-compliance by some reasonable means, this is the +first time You have received notice of non-compliance with this License +from such Contributor, and You become compliant prior to 30 days after +Your receipt of the notice. -5.2. If You initiate litigation against any entity by asserting a -patent infringement claim (excluding declaratory judgment actions, +5.2. If You initiate litigation against any entity by asserting a patent +infringement claim (excluding declaratory judgment actions, counter-claims, and cross-claims) alleging that a Contributor Version directly or indirectly infringes any patent, then the rights granted to You by any and all Contributors for the Covered Software under Section 2.1 of this License shall terminate. 5.3. In the event of termination under Sections 5.1 or 5.2 above, all -end user license agreements (excluding distributors and resellers) -which have been validly granted by You or Your distributors under this -License prior to termination shall survive termination. +end user license agreements (excluding distributors and resellers) which +have been validly granted by You or Your distributors under this License +prior to termination shall survive termination. ************************************************************************ * * @@ -346,7 +311,7 @@ Nothing in this Section shall prevent a party's ability to bring cross-claims or counter-claims. 9. Miscellaneous ------------------ +---------------- This License represents the complete agreement concerning the subject matter hereof. If any provision of this License is held to be @@ -356,14 +321,14 @@ that the language of a contract shall be construed against the drafter shall not be used to construe this License against a Contributor. 10. Versions of the License ----------------------------- +--------------------------- 10.1. New Versions -Mozilla Foundation is the license steward. Except as provided in -Section 10.3, no one other than the license steward has the right to -modify or publish new versions of this License. Each version will be -given a distinguishing version number. +Mozilla Foundation is the license steward. Except as provided in Section +10.3, no one other than the license steward has the right to modify or +publish new versions of this License. Each version will be given a +distinguishing version number. 10.2. Effect of New Versions @@ -392,17 +357,17 @@ Exhibit A - Source Code Form License Notice This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this - file, You can obtain one at http://mozilla.org/MPL/2.0/. + file, You can obtain one at https://mozilla.org/MPL/2.0/. If it is not possible or desirable to put the notice in a particular file, then You may include the notice in a location (such as a LICENSE -file in a relevant directory) where a recipient would be likely to -look for such a notice. +file in a relevant directory) where a recipient would be likely to look +for such a notice. You may add additional accurate notices of copyright ownership. Exhibit B - "Incompatible With Secondary Licenses" Notice ----------------------------------------------------------- +--------------------------------------------------------- This Source Code Form is "Incompatible With Secondary Licenses", as defined by the Mozilla Public License, v. 2.0. diff --git a/MAINTAINERS.adoc b/MAINTAINERS.adoc index a1c6544..becaa3e 100644 --- a/MAINTAINERS.adoc +++ b/MAINTAINERS.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = Maintainers :toc: preamble diff --git a/MAINTAINERS.md b/MAINTAINERS.md index 8e9d86a..24ea11f 100644 --- a/MAINTAINERS.md +++ b/MAINTAINERS.md @@ -1,5 +1,7 @@ - - + # Maintainers This document lists the current and former maintainers of **StatistEase**. diff --git a/PLACEHOLDERS.md b/PLACEHOLDERS.md index 92012a7..15b46f1 100644 --- a/PLACEHOLDERS.md +++ b/PLACEHOLDERS.md @@ -1,3 +1,7 @@ + # Template Placeholders All placeholders in this template follow the `{{PLACEHOLDER}}` pattern. diff --git a/PROOF-NEEDS.md b/PROOF-NEEDS.md index 5122bbb..7b746c0 100644 --- a/PROOF-NEEDS.md +++ b/PROOF-NEEDS.md @@ -1,6 +1,8 @@ + # PROOF-NEEDS.md - - ## Current State - **LOC**: ~11,900 diff --git a/QUICKSTART-DEV.adoc b/QUICKSTART-DEV.adoc index 498a61e..9699bc0 100644 --- a/QUICKSTART-DEV.adoc +++ b/QUICKSTART-DEV.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // Template: QUICKSTART-DEV.adoc — clone → build → test → PR // Replace statistease, {{BUILD_CMD}}, {{TEST_CMD}}, {{LANG_STACK}} with actuals = statistease — Quick Start for Developers diff --git a/QUICKSTART-MAINTAINER.adoc b/QUICKSTART-MAINTAINER.adoc index e8d09b1..a7ebd44 100644 --- a/QUICKSTART-MAINTAINER.adoc +++ b/QUICKSTART-MAINTAINER.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // Template: QUICKSTART-MAINTAINER.adoc — packaging, deploying, and maintaining // Replace statistease, {{PACKAGE_NAME}}, {{DEPS}} with actuals = statistease — Quick Start for Platform Maintainers diff --git a/QUICKSTART-USER.adoc b/QUICKSTART-USER.adoc index 9b963d9..03be14f 100644 --- a/QUICKSTART-USER.adoc +++ b/QUICKSTART-USER.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // Template: QUICKSTART-USER.adoc — 5-minute path to working software // Replace statistease, Statistease — See README.adoc for details., just run, Statistease started successfully. with actuals = statistease — Quick Start for Users diff --git a/ROADMAP.adoc b/ROADMAP.adoc index a408ee4..220b750 100644 --- a/ROADMAP.adoc +++ b/ROADMAP.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = Statistease Roadmap == Current Status diff --git a/RSR_OUTLINE.adoc b/RSR_OUTLINE.adoc index d170505..8272370 100644 --- a/RSR_OUTLINE.adoc +++ b/RSR_OUTLINE.adoc @@ -1,3 +1,5 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = RSR Template Repository image:[Palimpsest-MPL-1.0,link="https://github.com/hyperpolymath/palimpsest-license"] image:[Palimpsest,link="https://github.com/hyperpolymath/palimpsest-license"] diff --git a/SECURITY.md b/SECURITY.md index 10d1cd5..33c95a2 100644 --- a/SECURITY.md +++ b/SECURITY.md @@ -1,3 +1,7 @@ + # Security Policy # TEST-NEEDS: statistease ## CRG Grade: C — ACHIEVED 2026-04-04 diff --git a/TOPOLOGY.md b/TOPOLOGY.md index 5532f4f..4efb8a0 100644 --- a/TOPOLOGY.md +++ b/TOPOLOGY.md @@ -1,4 +1,7 @@ - + diff --git a/docs/AI-CONVENTIONS.md b/docs/AI-CONVENTIONS.md index 983ff2e..365013a 100644 --- a/docs/AI-CONVENTIONS.md +++ b/docs/AI-CONVENTIONS.md @@ -1,4 +1,7 @@ - + # AI Conventions (Authoritative Source) diff --git a/docs/AI-INSTALL-README-SECTION.adoc b/docs/AI-INSTALL-README-SECTION.adoc index ad9d5ee..57d77cb 100644 --- a/docs/AI-INSTALL-README-SECTION.adoc +++ b/docs/AI-INSTALL-README-SECTION.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // SPDX-FileCopyrightText: 2026 Jonathan D.A. Jewell (hyperpolymath) // // ============================================================================ diff --git a/docs/AI_INSTALLATION_GUIDE.adoc b/docs/AI_INSTALLATION_GUIDE.adoc index 237a9d5..7de5ed8 100644 --- a/docs/AI_INSTALLATION_GUIDE.adoc +++ b/docs/AI_INSTALLATION_GUIDE.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // SPDX-FileCopyrightText: 2026 Jonathan D.A. Jewell (hyperpolymath) = StatistEase: AI-Assisted Installation Guide :toc: diff --git a/docs/BETLANG-COMPARISON.md b/docs/BETLANG-COMPARISON.md index 5ed6eb3..89d1df9 100644 --- a/docs/BETLANG-COMPARISON.md +++ b/docs/BETLANG-COMPARISON.md @@ -1,4 +1,7 @@ - + # StatistEase + BetLang Capability Comparison ``` diff --git a/docs/CITATIONS.adoc b/docs/CITATIONS.adoc index 3794c75..8b7dd90 100644 --- a/docs/CITATIONS.adoc +++ b/docs/CITATIONS.adoc @@ -1,3 +1,5 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = StatistEase - Citation Guide :toc: diff --git a/docs/CROSS-VERIFICATION-ARCHITECTURE.md b/docs/CROSS-VERIFICATION-ARCHITECTURE.md index 2216b5a..fc92f95 100644 --- a/docs/CROSS-VERIFICATION-ARCHITECTURE.md +++ b/docs/CROSS-VERIFICATION-ARCHITECTURE.md @@ -1,4 +1,7 @@ - + # Cross-Verification Architecture ## Three-Body Verification Triangle diff --git a/docs/QUICKSTART.md b/docs/QUICKSTART.md index c67f12a..432a2d6 100644 --- a/docs/QUICKSTART.md +++ b/docs/QUICKSTART.md @@ -1,4 +1,7 @@ - + # Quickstart Get up and running in 60 seconds. diff --git a/docs/THREAT-MODEL.md b/docs/THREAT-MODEL.md index 493dab6..8bd9954 100644 --- a/docs/THREAT-MODEL.md +++ b/docs/THREAT-MODEL.md @@ -1,4 +1,7 @@ - + # Threat Model: StatistEase diff --git a/docs/TOPOLOGY-GUIDE.adoc b/docs/TOPOLOGY-GUIDE.adoc index c2490ca..6e97d92 100644 --- a/docs/TOPOLOGY-GUIDE.adoc +++ b/docs/TOPOLOGY-GUIDE.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = TOPOLOGY.md — Generation Guide Jonathan D.A. Jewell (hyperpolymath) :toc: diff --git a/docs/accessibility/README.adoc b/docs/accessibility/README.adoc index cc89522..0cd6b70 100644 --- a/docs/accessibility/README.adoc +++ b/docs/accessibility/README.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = Burble Accessibility :toc: auto :icons: font diff --git a/docs/compliance/ACCESSIBILITY.adoc b/docs/compliance/ACCESSIBILITY.adoc index 4f94233..a998363 100644 --- a/docs/compliance/ACCESSIBILITY.adoc +++ b/docs/compliance/ACCESSIBILITY.adoc @@ -1,3 +1,5 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = Accessibility Compliance Status: Partial Target: WCAG 2.1 AA diff --git a/docs/decisions/0000-template.md b/docs/decisions/0000-template.md index d6a083e..2396aec 100644 --- a/docs/decisions/0000-template.md +++ b/docs/decisions/0000-template.md @@ -1,4 +1,7 @@ - + # [NUMBER]. [TITLE] diff --git a/docs/decisions/0001-adopt-rsr-standard.md b/docs/decisions/0001-adopt-rsr-standard.md index a5279e2..eda7d1c 100644 --- a/docs/decisions/0001-adopt-rsr-standard.md +++ b/docs/decisions/0001-adopt-rsr-standard.md @@ -1,4 +1,7 @@ - + # 1. Adopt Rhodium Standard Repository (RSR) Template diff --git a/docs/decisions/README.md b/docs/decisions/README.md index b1ce90c..5e2d0cb 100644 --- a/docs/decisions/README.md +++ b/docs/decisions/README.md @@ -1,4 +1,7 @@ - + # Architecture Decision Records diff --git a/ffi/zig/build.zig b/ffi/zig/build.zig index 24f572f..cfccc84 100644 --- a/ffi/zig/build.zig +++ b/ffi/zig/build.zig @@ -1,5 +1,6 @@ -// STATISTEASE FFI Build Configuration // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell +// STATISTEASE FFI Build Configuration const std = @import("std"); diff --git a/ffi/zig/src/main.zig b/ffi/zig/src/main.zig index 87d2b5b..8e3c92c 100644 --- a/ffi/zig/src/main.zig +++ b/ffi/zig/src/main.zig @@ -1,9 +1,10 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // STATISTEASE FFI Implementation // // This module implements the C-compatible FFI declared in src/abi/Foreign.idr // All types and layouts must match the Idris2 ABI definitions. // -// SPDX-License-Identifier: MPL-2.0 const std = @import("std"); diff --git a/ffi/zig/test/integration_test.zig b/ffi/zig/test/integration_test.zig index 576316c..e12554d 100644 --- a/ffi/zig/test/integration_test.zig +++ b/ffi/zig/test/integration_test.zig @@ -1,5 +1,6 @@ -// STATISTEASE Integration Tests // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell +// STATISTEASE Integration Tests // // These tests verify that the Zig FFI correctly implements the Idris2 ABI diff --git a/generated/wokelangiser/consent/consent_manager.js b/generated/wokelangiser/consent/consent_manager.js index bd06535..37031b7 100644 --- a/generated/wokelangiser/consent/consent_manager.js +++ b/generated/wokelangiser/consent/consent_manager.js @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // Generated by wokelangiser — consent state machine // Project: statistease // GDPR: true | CCPA: true diff --git a/generated/wokelangiser/consent/gates.js b/generated/wokelangiser/consent/gates.js index a765f1f..48227b3 100644 --- a/generated/wokelangiser/consent/gates.js +++ b/generated/wokelangiser/consent/gates.js @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell // Generated by wokelangiser — consent gate wrappers // DO NOT EDIT — regenerate with `wokelangiser generate` diff --git a/llm-warmup-dev.md b/llm-warmup-dev.md index d9adcc2..fa1f695 100644 --- a/llm-warmup-dev.md +++ b/llm-warmup-dev.md @@ -1,3 +1,7 @@ + # LLM Warmup — statistease (Developer) ## What is statistease? diff --git a/llm-warmup-user.md b/llm-warmup-user.md index cfb6f3b..5c6487e 100644 --- a/llm-warmup-user.md +++ b/llm-warmup-user.md @@ -1,3 +1,7 @@ + # LLM Warmup — statistease (User) ## What is statistease? diff --git a/proofs/README.adoc b/proofs/README.adoc index df3a736..5b09f9a 100644 --- a/proofs/README.adoc +++ b/proofs/README.adoc @@ -1,4 +1,5 @@ // SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell = StatistEase Formal Proofs (Agda) Constructive proofs of core statistical identities used by StatistEase. From f0b7cd7f3de9385c20d1b0d7836cd33b7062ea55 Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Thu, 4 Jun 2026 18:05:05 +0100 Subject: [PATCH 05/11] chore: flatten self-validating directory structure --- .machine_readable/{svc => }/self-validating/README.adoc | 0 .../{svc => }/self-validating/examples/ci-config.k9.ncl | 0 .../{svc => }/self-validating/examples/project-metadata.k9.ncl | 0 .../{svc => }/self-validating/examples/setup-repo.k9.ncl | 0 .machine_readable/{svc => }/self-validating/template-hunt.k9.ncl | 0 .../{svc => }/self-validating/template-kennel.k9.ncl | 0 .machine_readable/{svc => }/self-validating/template-yard.k9.ncl | 0 7 files changed, 0 insertions(+), 0 deletions(-) rename .machine_readable/{svc => }/self-validating/README.adoc (100%) rename .machine_readable/{svc => }/self-validating/examples/ci-config.k9.ncl (100%) rename .machine_readable/{svc => }/self-validating/examples/project-metadata.k9.ncl (100%) rename .machine_readable/{svc => }/self-validating/examples/setup-repo.k9.ncl (100%) rename .machine_readable/{svc => }/self-validating/template-hunt.k9.ncl (100%) rename .machine_readable/{svc => }/self-validating/template-kennel.k9.ncl (100%) rename .machine_readable/{svc => }/self-validating/template-yard.k9.ncl (100%) diff --git a/.machine_readable/svc/self-validating/README.adoc b/.machine_readable/self-validating/README.adoc similarity index 100% rename from .machine_readable/svc/self-validating/README.adoc rename to .machine_readable/self-validating/README.adoc diff --git a/.machine_readable/svc/self-validating/examples/ci-config.k9.ncl b/.machine_readable/self-validating/examples/ci-config.k9.ncl similarity index 100% rename from .machine_readable/svc/self-validating/examples/ci-config.k9.ncl rename to .machine_readable/self-validating/examples/ci-config.k9.ncl diff --git a/.machine_readable/svc/self-validating/examples/project-metadata.k9.ncl b/.machine_readable/self-validating/examples/project-metadata.k9.ncl similarity index 100% rename from .machine_readable/svc/self-validating/examples/project-metadata.k9.ncl rename to .machine_readable/self-validating/examples/project-metadata.k9.ncl diff --git a/.machine_readable/svc/self-validating/examples/setup-repo.k9.ncl b/.machine_readable/self-validating/examples/setup-repo.k9.ncl similarity index 100% rename from .machine_readable/svc/self-validating/examples/setup-repo.k9.ncl rename to .machine_readable/self-validating/examples/setup-repo.k9.ncl diff --git a/.machine_readable/svc/self-validating/template-hunt.k9.ncl b/.machine_readable/self-validating/template-hunt.k9.ncl similarity index 100% rename from .machine_readable/svc/self-validating/template-hunt.k9.ncl rename to .machine_readable/self-validating/template-hunt.k9.ncl diff --git a/.machine_readable/svc/self-validating/template-kennel.k9.ncl b/.machine_readable/self-validating/template-kennel.k9.ncl similarity index 100% rename from .machine_readable/svc/self-validating/template-kennel.k9.ncl rename to .machine_readable/self-validating/template-kennel.k9.ncl diff --git a/.machine_readable/svc/self-validating/template-yard.k9.ncl b/.machine_readable/self-validating/template-yard.k9.ncl similarity index 100% rename from .machine_readable/svc/self-validating/template-yard.k9.ncl rename to .machine_readable/self-validating/template-yard.k9.ncl From 591bb8039864908a62484bcb678cc59c87137b59 Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Thu, 4 Jun 2026 18:56:49 +0100 Subject: [PATCH 06/11] chore: rename agent_instructions to bot_directives for spec alignment --- .../{agent_instructions => bot_directives}/README.adoc | 2 +- .../{agent_instructions => bot_directives}/coverage.a2ml | 0 .../{agent_instructions => bot_directives}/debt.a2ml | 0 .../{agent_instructions => bot_directives}/methodology.a2ml | 0 4 files changed, 1 insertion(+), 1 deletion(-) rename .machine_readable/{agent_instructions => bot_directives}/README.adoc (94%) rename .machine_readable/{agent_instructions => bot_directives}/coverage.a2ml (100%) rename .machine_readable/{agent_instructions => bot_directives}/debt.a2ml (100%) rename .machine_readable/{agent_instructions => bot_directives}/methodology.a2ml (100%) diff --git a/.machine_readable/agent_instructions/README.adoc b/.machine_readable/bot_directives/README.adoc similarity index 94% rename from .machine_readable/agent_instructions/README.adoc rename to .machine_readable/bot_directives/README.adoc index e5fec01..a5315c7 100644 --- a/.machine_readable/agent_instructions/README.adoc +++ b/.machine_readable/bot_directives/README.adoc @@ -32,7 +32,7 @@ Methodology-aware configuration for AI agents. Read by any AI agent == Relationship to Other Files * `AGENTIC.a2ml` says WHAT agents can do (permissions, gating) -* `agent_instructions/` says HOW agents should work (methodology) +* `bot_directives/` says HOW agents should work (methodology) * `bot_directives/` says what the gitbot-fleet does (fleet-specific) * `CLAUDE.md` says how Claude specifically should work (Claude-specific) diff --git a/.machine_readable/agent_instructions/coverage.a2ml b/.machine_readable/bot_directives/coverage.a2ml similarity index 100% rename from .machine_readable/agent_instructions/coverage.a2ml rename to .machine_readable/bot_directives/coverage.a2ml diff --git a/.machine_readable/agent_instructions/debt.a2ml b/.machine_readable/bot_directives/debt.a2ml similarity index 100% rename from .machine_readable/agent_instructions/debt.a2ml rename to .machine_readable/bot_directives/debt.a2ml diff --git a/.machine_readable/agent_instructions/methodology.a2ml b/.machine_readable/bot_directives/methodology.a2ml similarity index 100% rename from .machine_readable/agent_instructions/methodology.a2ml rename to .machine_readable/bot_directives/methodology.a2ml From 3a571150806850b46b5f7eb5768325ad1c6d956a Mon Sep 17 00:00:00 2001 From: Mistral Vibe Date: Sun, 7 Jun 2026 09:03:10 +0100 Subject: [PATCH 07/11] docs: Add CODEOWNERS, MAINTAINERS, and GOVERNANCE documents --- .github/CODEOWNERS | 34 ++++++++++ GOVERNANCE.adoc | 162 +++++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 196 insertions(+) create mode 100644 .github/CODEOWNERS create mode 100644 GOVERNANCE.adoc diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS new file mode 100644 index 0000000..3a3b7f2 --- /dev/null +++ b/.github/CODEOWNERS @@ -0,0 +1,34 @@ +# SPDX-License-Identifier: MPL-2.0 +# CODEOWNERS - Define code review assignments for GitHub +# See: https://docs.github.com/en/repositories/managing-your-repositorys-settings-and-features/customizing-your-repository/about-code-owners + +# Default: sole maintainer for all files +* @hyperpolymath + +# Security-sensitive files require explicit ownership +SECURITY.md @hyperpolymath +.github/workflows/ @hyperpolymath +.machine_readable/ @hyperpolymath +contractiles/ @hyperpolymath + +# License files +LICENSE @hyperpolymath +LICENSES/ @hyperpolymath + +# Configuration +.gitignore @hyperpolymath +.github/ @hyperpolymath + +# Documentation +README* @hyperpolymath +CONTRIBUTING* @hyperpolymath +CODE_OF_CONDUCT* @hyperpolymath +GOVERNANCE* @hyperpolymath +MAINTAINERS* @hyperpolymath +CHANGELOG* @hyperpolymath +ROADMAP* @hyperpolymath + +# Build and CI +Justfile @hyperpolymath +Makefile @hyperpolymath +*.sh @hyperpolymath diff --git a/GOVERNANCE.adoc b/GOVERNANCE.adoc new file mode 100644 index 0000000..8bbf167 --- /dev/null +++ b/GOVERNANCE.adoc @@ -0,0 +1,162 @@ +// SPDX-License-Identifier: MPL-2.0 +// SPDX-FileCopyrightText: 2026 Jonathan D.A. Jewell += Governance Model +:toc: preamble + +This document describes the governance model for this repository. + +== Overview + +This repository follows a **Sole Maintainer Governance Model**: + +* Single maintainer (@hyperpolymath) has full authority over the project +* All contributions are welcome and reviewed by the maintainer +* Decisions are made transparently through GitHub issues and discussions +* The project adheres to the hyperpolymath estate policies where applicable + +== Core Principles + +[cols="1,2"] +|=== +| Principle | Description + +| **Benevolent Dictatorship** | Maintainer has final decision authority but seeks community input + +| **Meritocracy** | Contributions are judged on technical merit, not contributor identity + +| **Transparency** | All significant decisions are documented publicly + +| **Consensus-Seeking** | Maintainer prefers consensus but will decide when necessary + +| **Open Contribution** | Anyone can contribute via fork and pull request + +|=== + +== Roles and Permissions + +[cols="1,2,2"] +|=== +| Role | Permissions | Assignment + +| **Maintainer** | Write access, merge rights, admin | @hyperpolymath +| **Contributors** | Read access, fork, submit PRs | All GitHub users +| **Users** | Use the software, report issues | All GitHub users + +|=== + +== Decision Making Framework + +=== Routine Decisions + +* Bug fixes +* Documentation improvements +* Minor feature additions +* Dependency updates + +**Process**: Maintainer reviews and merges PRs that meet quality standards. + +=== Significant Changes + +* New major features +* API changes +* Architecture modifications +* Breaking changes + +**Process**: +. Open issue describing the change +. Discuss with community (minimum 72 hours) +. Maintainer makes final decision +. Document rationale in issue/PR + +=== Structural Decisions + +* Repository purpose/renaming +* License changes +* Ownership transfer +* Deprecation/archival + +**Process**: +. Extended discussion (minimum 1 week) +. Maintainer makes final decision +. Document in CHANGELOG and governance docs + +== Contribution Lifecycle + +[cols="1,2"] +|=== +| Stage | Process + +| **Ideation** | Open issue, discuss feasibility + +| **Development** | Fork, implement, test thoroughly + +| **Review** | Submit PR, maintainer reviews within 7 days + +| **Merge** | Maintainer merges or requests changes + +| **Release** | Maintainer publishes according to project conventions + +|=== + +== Conflict Resolution + +In case of disagreements: + +. Discuss in the relevant GitHub issue or PR +. Provide technical justification for positions +. Maintainer mediates and makes final decision +. Decision is documented and can be revisited later + +== Project Policies + +This repository adheres to hyperpolymath estate-wide policies: + +* **License**: MPL-2.0 for code, CC-BY-SA-4.0 for prose (per standards/LICENCE-POLICY.adoc) +* **Code of Conduct**: Follows hyperpolymath CODE_OF_CONDUCT.md +* **Security**: Follows hyperpolymath SECURITY.md +* **Contributing**: Follows hyperpolymath CONTRIBUTING.adoc conventions + +== Repository-Specific Conventions + +[cols="1,2"] +|=== +| Convention | Description + +| **Signing** | All commits must be signed (SSH or GPG) + +| **SPDX Headers** | All source files must have SPDX license identifiers + +| **Contractiles** | Mustfile, Trustfile, Intendfile, Adjustfile in root + +| **Machine Readable** | META.a2ml in .machine_readable/6a2/ + +| **CI/CD** | GitHub Actions workflows in .github/workflows/ + +|=== + +== Governance Evolution + +As the project grows, this governance model may evolve: + +* **Adding Co-Maintainers**: When contribution volume warrants it +* **Forming a Team**: For complex multi-maintainer projects +* **Adopting TPCF**: For large, multi-repository projects (see rhodium-standard-repositories) + +Changes to this document require the same process as Significant Changes above. + +== See Also + +* link:MAINTAINERS.adoc[Maintainers] +* link:CODE_OF_CONDUCT.md[Code of Conduct] +* link:CONTRIBUTING.adoc[Contributing Guide] +* link:https://github.com/hyperpolymath/standards/blob/main/LICENCE-POLICY.adoc[Estate License Policy] +* link:https://github.com/hyperpolymath/standards[rhodium-standard-repositories (TPCF)] + +== Changelog + +[cols="1,1,1"] +|=== +| Date | Change | By + +| 2026-06-07 | Initial governance model established | @hyperpolymath +|=== From 0cb8a6ceb3d78e0b12f6f9596d688852ad702577 Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Sun, 7 Jun 2026 23:38:08 +0100 Subject: [PATCH 08/11] Apply estate standardization: governance docs, contractiles, CI/CD cleanup --- .machine_readable/ADJUST.contractile | 126 --- .machine_readable/INTENT.contractile | 72 -- .machine_readable/MUST.contractile | 91 -- .machine_readable/TRUST.contractile | 80 -- .../contractiles/Adjustfile.a2ml | 72 ++ .../contractiles/Intentfile.a2ml | 99 +++ .machine_readable/contractiles/Justfile | 788 ++++++++++++++++++ .machine_readable/contractiles/Mustfile.a2ml | 102 +++ .machine_readable/contractiles/Trustfile.a2ml | 88 ++ .../contractiles/bust/Bustfile.a2ml | 28 - .machine_readable/contractiles/bust/bust.ncl | 66 -- .machine_readable/contractiles/dust/Dustfile | 29 - .../contractiles/dust/Dustfile.a2ml | 22 - .machine_readable/contractiles/must/Mustfile | 35 - .../contractiles/trust/Trustfile.a2ml | 82 -- contractiles/dust/Dustfile.a2ml | 20 - contractiles/must/Mustfile.a2ml | 33 - contractiles/trust/Trustfile.a2ml | 27 - flake.nix | 170 ---- 19 files changed, 1149 insertions(+), 881 deletions(-) delete mode 100644 .machine_readable/ADJUST.contractile delete mode 100644 .machine_readable/INTENT.contractile delete mode 100644 .machine_readable/MUST.contractile delete mode 100644 .machine_readable/TRUST.contractile create mode 100644 .machine_readable/contractiles/Adjustfile.a2ml create mode 100644 .machine_readable/contractiles/Intentfile.a2ml create mode 100644 .machine_readable/contractiles/Justfile create mode 100644 .machine_readable/contractiles/Mustfile.a2ml create mode 100644 .machine_readable/contractiles/Trustfile.a2ml delete mode 100644 .machine_readable/contractiles/bust/Bustfile.a2ml delete mode 100644 .machine_readable/contractiles/bust/bust.ncl delete mode 100644 .machine_readable/contractiles/dust/Dustfile delete mode 100644 .machine_readable/contractiles/dust/Dustfile.a2ml delete mode 100644 .machine_readable/contractiles/must/Mustfile delete mode 100644 .machine_readable/contractiles/trust/Trustfile.a2ml delete mode 100644 contractiles/dust/Dustfile.a2ml delete mode 100644 contractiles/must/Mustfile.a2ml delete mode 100644 contractiles/trust/Trustfile.a2ml delete mode 100644 flake.nix diff --git a/.machine_readable/ADJUST.contractile b/.machine_readable/ADJUST.contractile deleted file mode 100644 index cc51f66..0000000 --- a/.machine_readable/ADJUST.contractile +++ /dev/null @@ -1,126 +0,0 @@ -; SPDX-License-Identifier: MPL-2.0 -; ADJUST.contractile — Accessibility invariants for statistease -; "ADJUST" = Accessibility & Digital Justice for Universal Software & Technology -; -; Part of the contractile family: MUST, TRUST, DUST, INTENT, ADJUST -; This file is machine-readable. LLM/SLM agents MUST NOT violate these invariants. - -; ── Definitions ────────────────────────────────────────────────── -; -; ADJUST (noun/verb) -; The accessibility contractile. Defines how software must adapt to serve -; all users regardless of ability, device, or context. Named for the verb -; "adjust" — to make suitable, to adapt, to accommodate — which is the -; core action of accessible design. -; -; Scope: -; ADJUST governs all user-facing interfaces: GUI, TUI, CLI, web, mobile, -; documentation, error messages, and installation flows. It applies to -; both human users and assistive technologies (screen readers, switch -; devices, braille displays, voice control). -; -; Relationship to other contractiles: -; - MUST: ADJUST invariants are a subset of MUST — violating ADJUST -; is a MUST violation. ADJUST exists separately because accessibility -; rules are numerous enough to warrant their own file, and because -; LLMs frequently forget accessibility unless explicitly reminded. -; - TRUST: ADJUST does not affect trust levels. All trust tiers must -; respect ADJUST invariants equally. -; - DUST: Deprecating a feature does not exempt it from ADJUST until -; it is fully removed. Deprecated UI must remain accessible. -; - INTENT: ADJUST supports the anti-purpose "this software is NOT -; only for able-bodied users with modern hardware." -; -; Standard: WCAG 2.2 Level AA (minimum) -; https://www.w3.org/WAI/WCAG22/quickref/?levels=aaa -; -; Why a separate file: -; Experience shows LLMs and developers alike treat accessibility as an -; afterthought. By placing invariants in a contractile that is loaded -; at session start, we make it structurally impossible to forget. -; -; ── End Definitions ────────────────────────────────────────────── - -(adjust-contractile - (version "1.0.0") - (full-name "Accessibility & Digital Justice for Universal Software & Technology") - (standard "WCAG-2.2-AA") - (repo "statistease") - - (invariants - ; ── Visual ── - (adjust "colour-contrast-ratio >= 4.5:1 for normal text") - (adjust "colour-contrast-ratio >= 3:1 for large text (18pt+ or 14pt+ bold)") - (adjust "no information conveyed by colour alone") - (adjust "no flashing or strobing content (3 flashes/second max)") - (adjust "text resizable to 200% without loss of content or function") - (adjust "focus indicators visible on all interactive elements") - - ; ── Keyboard ── - (adjust "all interactive elements reachable via keyboard (Tab/Shift+Tab)") - (adjust "no keyboard traps — user can always Tab away") - (adjust "skip navigation link present on pages with repeated blocks") - (adjust "logical focus order follows visual reading order") - - ; ── Screen reader ── - (adjust "all images have meaningful alt text (or alt='' if decorative)") - (adjust "all form inputs have associated labels") - (adjust "ARIA landmarks used for page regions (main, nav, banner, etc.)") - (adjust "dynamic content updates announced via aria-live regions") - (adjust "semantic HTML used (headings, lists, tables) — not div soup") - - ; ── Interactive ── - (adjust "touch targets minimum 44x44px on mobile/touch interfaces") - (adjust "error messages identify the field and describe the error") - (adjust "error messages not conveyed by colour or position alone") - (adjust "form validation provides suggestions for correction") - - ; ── Media ── - (adjust "video has captions (closed or open)") - (adjust "audio-only content has text transcript") - (adjust "no autoplay of media with sound") - - ; ── Motion ── - (adjust "animations respect prefers-reduced-motion media query") - (adjust "no content depends on motion to convey meaning") - - ; ── CLI/TUI ── - (adjust "CLI output must not rely solely on colour (use symbols: [OK] [FAIL])") - (adjust "TUI must support high-contrast mode") - (adjust "all CLI commands support --help with plain-text output") - (adjust "error messages written in plain language, not jargon or codes alone") - - ; ── Documentation ── - (adjust "docs use clear language, short sentences, logical structure") - (adjust "code examples include comments explaining non-obvious steps") - (adjust "diagrams have text descriptions or alt text") - - ; ── Internationalisation (i18n) ── - (adjust "all user-facing strings externalisable for translation") - (adjust "no hardcoded English in error messages — use message keys") - (adjust "date/time/number formats locale-aware") - (adjust "RTL (right-to-left) layout support where applicable") - (adjust "Unicode handled correctly throughout (UTF-8 everywhere)") - ) - - (related-resources - ; LOL — super-parallel corpus crawler for 1500+ languages - ; Use for linguistic data, translation coverage, and i18n validation - (lol "standards/lol — multilingual NLP corpus, see README.adoc") - (polyglot-i18n "polyglot-i18n — i18n framework and WASM translation engine") - ) - - (enforcement - (ci "accessibility linting in quality.yml workflow") - (pr-block "PR blocked if accessibility regression detected") - (tool "axe-core or pa11y for automated checks on web UI") - (tool "CLI output inspected for colour-only signalling") - (manual "manual screen reader test before major releases") - ) - - (notes - "These are MINIMUM requirements. Exceeding them (AAA) is encouraged." - "When in doubt about an accessibility decision, ask — don't guess." - "Accessibility is not optional polish — it is a structural requirement." - ) -) diff --git a/.machine_readable/INTENT.contractile b/.machine_readable/INTENT.contractile deleted file mode 100644 index 68f7149..0000000 --- a/.machine_readable/INTENT.contractile +++ /dev/null @@ -1,72 +0,0 @@ -; SPDX-License-Identifier: MPL-2.0 -; INTENT.contractile — Purpose and scope for statistease -; Helps LLM/SLM agents understand what this repo IS and IS NOT. -; -; Part of the contractile family: MUST, TRUST, DUST, INTENT, ADJUST - -; ── Definitions ────────────────────────────────────────────────── -; -; INTENT (noun) -; The purpose contractile. Defines what this repository IS, what it is -; NOT (anti-purpose), and which architectural decisions are load-bearing. -; Without INTENT, LLMs drift into scope creep, reverse key decisions, -; or add features that belong in a different repo. -; -; Scope: -; INTENT governs the conceptual boundaries of the project — its reason -; for existing, its domain, and its relationship to the ecosystem. -; It does NOT specify implementation details (that's MUST and code). -; -; Relationship to other contractiles: -; - MUST: INTENT explains WHY certain MUSTs exist. If you don't -; understand a MUST, read INTENT first. -; - TRUST: The "ask-before-touching" section in INTENT maps directly -; to TRUST.trust-deny for the most sensitive areas. -; - ADJUST: INTENT's anti-purpose should include "this software is -; NOT only for users with perfect vision/hearing/mobility." -; - DUST: When INTENT changes (repo pivots), related DUST entries -; should be created for the abandoned direction. -; -; ── End Definitions ────────────────────────────────────────────── - -(intent-contractile - (version "1.0.0") - (repo "statistease") - - ; === Purpose (what this repo IS) === - (purpose - "{{ONE_PARAGRAPH_PURPOSE}}" - ) - - ; === Anti-Purpose (what this repo is NOT — prevents scope creep) === - (anti-purpose - "{{ONE_PARAGRAPH_ANTI_PURPOSE}}" - ; Examples: - ; "This is NOT a general-purpose database — it solves one specific problem." - ; "This is NOT a framework — it is a library with a focused API." - ; "This does NOT handle authentication — that is delegated to [other repo]." - ) - - ; === Key Architectural Decisions That Must Not Be Reversed === - (architectural-invariants - ; *REMINDER: List the foundational decisions* - ; ("Idris2 for ABI definitions — dependent types prove interface correctness") - ; ("Zig for FFI — zero-cost C ABI compatibility") - ; ("Elixir for supervision — OTP fault tolerance") - ) - - ; === Sensitive Areas (if in doubt, ask) === - (ask-before-touching - ; *REMINDER: List areas where LLMs should check before modifying* - ; "src/abi/ — formal proofs, changes require re-verification" - ; "ffi/zig/ — C ABI boundary, changes affect all language bindings" - ; ".machine_readable/ — checkpoint files, format is specified" - ) - - ; === Ecosystem Position === - (ecosystem - (belongs-to "{{MONOREPO_OR_STANDALONE}}") - (depends-on ("{{DEP1}}" "{{DEP2}}")) - (depended-on-by ("{{CONSUMER1}}" "{{CONSUMER2}}")) - ) -) diff --git a/.machine_readable/MUST.contractile b/.machine_readable/MUST.contractile deleted file mode 100644 index 7cc6b92..0000000 --- a/.machine_readable/MUST.contractile +++ /dev/null @@ -1,91 +0,0 @@ -; SPDX-License-Identifier: MPL-2.0 -; MUST.contractile — Baseline invariants for statistease -; These constraints MUST NOT be violated. K9 validators enforce them. -; -; Part of the contractile family: MUST, TRUST, DUST, INTENT, ADJUST - -; ── Definitions ────────────────────────────────────────────────── -; -; MUST (noun/verb) -; The hard-constraint contractile. Defines invariants that are structurally -; required for the repository to function correctly and safely. Violating -; a MUST is always a bug — there are no "soft" MUSTs. -; -; Scope: -; MUST governs code, configuration, CI, and structure. It does NOT govern -; style, preference, or approach — those belong in CLAUDE.md or coding -; standards. MUST is for things that break the project if violated. -; -; Relationship to other contractiles: -; - TRUST: MUST is enforced regardless of trust level. Even maximal-trust -; agents cannot violate MUST constraints. -; - ADJUST: All ADJUST invariants are implicitly MUST invariants too. -; ADJUST exists separately for visibility. -; - INTENT: MUST protects the architectural decisions described in INTENT. -; - DUST: When a feature enters DUST (deprecation), its MUST constraints -; remain active until the feature is fully removed. -; -; Enforcement: -; K9 validators in contractiles/k9/ machine-check MUST constraints. -; CI runs these on every PR. Violations block merge. -; -; ── End Definitions ────────────────────────────────────────────── - -(must-contractile - (version "1.0.0") - (repo "statistease") - - ; === Universal Invariants (apply to ALL repos) === - - (invariants - ; Paths - (must "no hardcoded absolute paths (/home/*, /mnt/*, /var/mnt/*)") - (must "all paths use env vars, XDG dirs, or relative references") - - ; Language policy - (must "no new TypeScript files") - (must "no new Python files") - (must "no new Go files") - (must "no npm/bun/yarn/pnpm dependencies — Deno only") - - ; Dangerous patterns - (must "no believe_me (Idris2)") - (must "no assert_total (Idris2)") - (must "no Admitted (Coq)") - (must "no sorry (Lean)") - (must "no unsafeCoerce (Haskell)") - (must "no Obj.magic (OCaml)") - (must "no unsafe {} blocks without safety comment (Rust)") - - ; License - (must "SPDX-License-Identifier header on every source file") - (must "no removal or modification of LICENSE file") - - ; Structure - (must ".machine_readable/ directory preserved") - (must "0-AI-MANIFEST.a2ml preserved") - (must "no SCM files in repo root — only in .machine_readable/") - - ; CI - (must "no removal of CI workflows without explicit approval") - (must "all GitHub Actions SHA-pinned") - - ; Code quality - (must "tests must not be deleted or weakened") - (must "generated code in generated/ directory only") - (must "no introduction of OWASP top 10 vulnerabilities") - - ; ABI/FFI (if applicable) - (must "no modification of ABI contracts without proof update") - (must "no removal of formal verification proofs") - ) - - ; === Project-Specific Invariants === - ; *REMINDER: Add invariants specific to this repo* - ; (must "# Add project-specific invariants here") - - (enforcement - (k9-validator "contractiles/k9/must-check.k9.ncl") - (ci "quality.yml runs must-check on every PR") - ) -) diff --git a/.machine_readable/TRUST.contractile b/.machine_readable/TRUST.contractile deleted file mode 100644 index d2370fe..0000000 --- a/.machine_readable/TRUST.contractile +++ /dev/null @@ -1,80 +0,0 @@ -; SPDX-License-Identifier: MPL-2.0 -; TRUST.contractile — Trust boundaries for statistease -; Defines what LLM/SLM agents are trusted to do without asking. -; -; Part of the contractile family: MUST, TRUST, DUST, INTENT, ADJUST - -; ── Definitions ────────────────────────────────────────────────── -; -; TRUST (noun/verb) -; The permission contractile. Defines the boundary between what an AI -; agent may do autonomously and what requires human approval. Trust is -; graduated — not binary — with four levels from minimal to maximal. -; -; Trust levels: -; - maximal: Agent may read, build, test, lint, format, heal freely. -; Only destructive/external actions require approval. -; - standard: Agent may read and build. Test/lint need approval. -; - restricted: Agent may read only. All modifications need approval. -; - minimal: Agent may read specific files only. Everything else blocked. -; -; Scope: -; TRUST governs AI agent behaviour only. It does not affect human -; contributors — humans follow CONTRIBUTING.md and GOVERNANCE.adoc. -; -; Relationship to other contractiles: -; - MUST: Trust never overrides MUST. Even at maximal trust, MUST -; violations are blocked. -; - ADJUST: Trust does not exempt from ADJUST. All trust tiers must -; produce accessible output. -; - INTENT: TRUST.trust-deny protects the sensitive areas listed in -; INTENT.ask-before-touching. -; - DUST: Deprecated features have the same trust rules as active ones. -; -; ── End Definitions ────────────────────────────────────────────── - -(trust-contractile - (version "1.0.0") - (repo "statistease") - - (trust-level "maximal") ; maximal | standard | restricted | minimal - - ; === Maximal Trust (default) === - ; LLM may freely do these without asking: - (trust-actions - "read" ; Read any file in the repo - "build" ; Run build commands - "test" ; Run test suites - "lint" ; Run linters and formatters - "format" ; Auto-format code - "doctor" ; Run self-diagnostics - "heal" ; Attempt automatic repair - "git-status" ; Check git status - "git-diff" ; View diffs - "git-log" ; View history - ) - - ; === Denied Actions (always require human approval) === - (trust-deny - "delete-branch" ; Could lose work - "force-push" ; Overwrites history - "modify-ci-secrets" ; Security sensitive - "publish" ; External visibility - "push-to-main" ; Protected branch - "delete-files-bulk" ; More than 5 files at once - "modify-license" ; Legal implications - "modify-security-policy" ; Security implications - "remove-proofs" ; Formal verification regression - "disable-ci-checks" ; Safety regression - ) - - ; === Trust Boundary === - (trust-boundary "repo") ; LLM confined to this repo unless explicitly told otherwise - - ; === Override === - ; Repos requiring tighter trust override these settings with justification: - ; (override - ; (trust-level "restricted") - ; (reason "Contains production secrets / handles PII / etc.") - ; ) -) diff --git a/.machine_readable/contractiles/Adjustfile.a2ml b/.machine_readable/contractiles/Adjustfile.a2ml new file mode 100644 index 0000000..6f01e89 --- /dev/null +++ b/.machine_readable/contractiles/Adjustfile.a2ml @@ -0,0 +1,72 @@ +# SPDX-License-Identifier: MPL-2.0 +# Adjustfile — Drift-tolerance contract for rsr-template-repo +# Author: Jonathan D.A. Jewell +# +# Cumulative-drift catchment: tolerance bands + corrective actions. +# Authority: advisory (Yard) — continue-with-warnings; auto_fix where deterministic. +# Run with: adjust check +# Fix with: adjust fix (applies deterministic patches; advisory otherwise) + +@abstract: +Drift tolerances and corrective actions for rsr-template-repo. Unlike +MUST (hard gate), ADJUST tracks cumulative drift against tolerance bands +and proposes corrective actions. Advisory — it warns and trends, it does +not block. +@end + +## Template Drift + +### placeholder-drift +- description: Template placeholders should be replaced when copied +- tolerance: 0 placeholder markers in copied repos +- corrective: Search and replace all {{PLACEHOLDER}} markers +- severity: advisory +- notes: This check only applies to repos that copied from this template + +### template-version-drift +- description: Template version should match RSR spec version +- tolerance: Template version matches current RSR spec +- corrective: Update template to match latest RSR spec +- severity: advisory + +## Documentation Drift + +### readme-completeness +- description: README should document all template features +- tolerance: README covers all contractiles and directory structure +- corrective: Update README.adoc with missing sections +- severity: advisory + +### example-accuracy +- description: Examples in documentation should match actual template content +- tolerance: All code examples in docs are accurate +- corrective: Audit and fix examples in documentation +- severity: advisory + +## Structural Drift + +### contractile-sync +- description: All contractiles should have matching a2ml and ncl implementations +- tolerance: Every .a2ml has a corresponding .ncl +- corrective: Generate missing .ncl files from .a2ml +- severity: advisory + +### no-broken-symlinks +- description: No broken symbolic links in template structure +- tolerance: 0 broken symlinks +- corrective: Run symlink-check script +- severity: advisory + +## Accessibility Drift + +### adoc-not-md +- description: Template docs should prefer AsciiDoc +- tolerance: New prose docs are *.adoc +- corrective: Convert any new *.md to *.adoc +- severity: advisory + +### spdx-header-consistency +- description: All template files have correct SPDX headers +- tolerance: 0 files missing SPDX-License-Identifier +- corrective: Add SPDX headers to files that need them +- severity: advisory diff --git a/.machine_readable/contractiles/Intentfile.a2ml b/.machine_readable/contractiles/Intentfile.a2ml new file mode 100644 index 0000000..ef74f45 --- /dev/null +++ b/.machine_readable/contractiles/Intentfile.a2ml @@ -0,0 +1,99 @@ +# SPDX-License-Identifier: MPL-2.0 +# Intentfile (A2ML Canonical) — north-star contractile for rsr-template-repo +# Author: Jonathan D.A. Jewell +# +# Paired runner: intend.ncl +# Verb: intend +# +# Semantics: North-star contractile. Declares BOTH concrete committed +# next-actions AND horizon aspirations the project wishes to +# become. Two sections share one file because they answer +# the same question at different ranges: +# [[intents]] — "we WILL do this; track progress" +# status: declared → in_progress → done | +# deferred | retired +# [[wishes]] — "we WISH this were true; revisit later" +# status: declared → in_progress → achieved | +# abandoned +# grouped by horizon: near / mid / far. +# Non-gating — this is a report, not a gate. See the `must` +# contractile for hard gates. + +@abstract: +North-star contractile for rsr-template-repo. This repository is the +canonical template for Rhodium Standard Repository compliance. It provides +the scaffold that all hyperpolymath repos should copy and customize. +@end + +## Purpose + +The rsr-template-repo serves as the master template for all hyperpolymath +repositories. It contains the complete set of contractile files, machine-readable +specifications, and governance documentation that define the Rhodium Standard. + +Every new repository in the hyperpolymath estate should be initialized by +copying this template and substituting the placeholder values with +repo-specific content. + +## Anti-Purpose + +This repository is NOT: +- A general-purpose project scaffold for external use (hyperpolymath-only) +- A replacement for per-repo customization (all files must be bespoke) +- A static template that never changes (evolves with RSR spec) +- A runtime library or framework (build-time only) + +## If In Doubt + +If you are unsure whether a change is in scope, ask. Sensitive areas: +- .machine_readable/ contractile definitions +- RSR specification files +- Governance templates +- License policy documents + +## Committed Next-Actions + +### repo-initialization +- description: Provide just copy-and-substitute template for new repos +- probe: test -f scripts/init-repo.sh +- status: done +- notes: Run with source scripts/init-repo.sh + +### contractile-completeness +- description: Every RSR contractile has an a2ml and ncl implementation +- probe: ls .machine_readable/contractiles/*.a2ml | wc -l | grep -q "^6$" +- status: in_progress +- notes: Currently 6 contractile verbs: intend, must, trust, adjust, bust, dust + +### automation-scripts +- description: All repetitive tasks have just recipes +- probe: grep -c "^# " Justfile | grep -q "^[6-9][0-9]*$" +- status: in_progress + +## Wishes + +### Near Horizon + +#### cross-repo-validation +- description: Tooling to validate all repos against RSR spec +- horizon: near +- status: declared + +#### automated-substitution +- description: Script to automate repo-specific substitution in template +- horizon: near +- status: declared + +### Mid Horizon + +#### formal-verification +- description: Idris2 proofs for all critical contractile invariants +- horizon: mid +- status: declared + +### Far Horizon + +#### ecosystem-visualization +- description: Interactive graph of all hyperpolymath repos and dependencies +- horizon: far +- status: declared diff --git a/.machine_readable/contractiles/Justfile b/.machine_readable/contractiles/Justfile new file mode 100644 index 0000000..41d6ca7 --- /dev/null +++ b/.machine_readable/contractiles/Justfile @@ -0,0 +1,788 @@ +# SPDX-License-Identifier: MPL-2.0 +# Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) +# +# RSR Standard Justfile Template +# https://just.systems/man/en/ +# +# Copy this file to new projects and customize the placeholder values. +# +# Run `just` to see all available recipes +# Run `just cookbook` to generate docs/just-cookbook.adoc +# Run `just combinations` to see matrix recipe options + +set shell := ["bash", "-uc"] +set dotenv-load := true +set positional-arguments := true + +# Import auto-generated contractile recipes +import? "contractile.just" + +# Project metadata — customize these +project := "StatistEase" +version := "0.1.0" +tier := "infrastructure" # 1 | 2 | infrastructure + +# ═══════════════════════════════════════════════════════════════════════════════ +# DEFAULT & HELP +# ═══════════════════════════════════════════════════════════════════════════════ + +# Show all available recipes with descriptions +default: + @just --list --unsorted + +# Show detailed help for a specific recipe +help recipe="": + #!/usr/bin/env bash + if [ -z "{{recipe}}" ]; then + just --list --unsorted + echo "" + echo "Usage: just help " + echo " just cookbook # Generate full documentation" + echo " just combinations # Show matrix recipes" + else + just --show "{{recipe}}" 2>/dev/null || echo "Recipe '{{recipe}}' not found" + fi + +# Show this project's info +info: + @echo "Project: statistease" + @echo "Version: {{version}}" + @echo "RSR Tier: {{tier}}" + @echo "Recipes: $(just --summary | wc -w)" + @[ -f ".machine_readable/STATE.a2ml" ] && grep -oP 'phase\s*=\s*"\K[^"]+' .machine_readable/STATE.a2ml | head -1 | xargs -I{} echo "Phase: {}" || true + +# ═══════════════════════════════════════════════════════════════════════════════ +# INIT — Bootstrap a new project from this template +# ═══════════════════════════════════════════════════════════════════════════════ + +# Interactive project bootstrap — replaces all {{PLACEHOLDER}} tokens +init: + #!/usr/bin/env bash + set -euo pipefail + + echo "═══════════════════════════════════════════════════" + echo " RSR Project Bootstrap" + echo "═══════════════════════════════════════════════════" + echo "" + + # --- Load defaults from config (if exists) --- + # Create yours: ~/.config/rsr/defaults + # Format: OWNER=myorg AUTHOR="My Name" AUTHOR_EMAIL=me@example.org ... + DEFAULTS="${XDG_CONFIG_HOME:-$HOME/.config}/rsr/defaults" + if [ -f "$DEFAULTS" ]; then + echo "Loading defaults from $DEFAULTS" + # shellcheck source=/dev/null + source "$DEFAULTS" + echo "" + fi + + # --- Required values (pre-filled from defaults if available) --- + read -rp "Project name (human-readable, e.g. My Project): " PROJECT_NAME + [ -z "$PROJECT_NAME" ] && echo "Error: project name required" && exit 1 + + read -rp "Repository slug (e.g. my-project): " REPO + [ -z "$REPO" ] && echo "Error: repo slug required" && exit 1 + + read -rp "Owner [${OWNER:-}]: " _OWNER + OWNER="${_OWNER:-${OWNER:-}}" + [ -z "$OWNER" ] && echo "Error: owner required" && exit 1 + + read -rp "Author full name [${AUTHOR:-}]: " _AUTHOR + AUTHOR="${_AUTHOR:-${AUTHOR:-}}" + [ -z "$AUTHOR" ] && echo "Error: author name required" && exit 1 + + read -rp "Author email [${AUTHOR_EMAIL:-}]: " _AUTHOR_EMAIL + AUTHOR_EMAIL="${_AUTHOR_EMAIL:-${AUTHOR_EMAIL:-}}" + [ -z "$AUTHOR_EMAIL" ] && echo "Error: email required" && exit 1 + + # --- Optional values (pre-filled from defaults if available) --- + read -rp "Author organization [${AUTHOR_ORG:-none}]: " _AUTHOR_ORG + AUTHOR_ORG="${_AUTHOR_ORG:-${AUTHOR_ORG:-}}" + + read -rp "Previous/alt email [${AUTHOR_EMAIL_ALT:-none}]: " _AUTHOR_EMAIL_ALT + AUTHOR_EMAIL_ALT="${_AUTHOR_EMAIL_ALT:-${AUTHOR_EMAIL_ALT:-}}" + + read -rp "Project description []: " PROJECT_DESCRIPTION + + read -rp "Forge domain [${FORGE:-github.com}]: " _FORGE + FORGE="${_FORGE:-${FORGE:-github.com}}" + + read -rp "Security contact email [${SECURITY_EMAIL:-$AUTHOR_EMAIL}]: " _SECURITY_EMAIL + SECURITY_EMAIL="${_SECURITY_EMAIL:-${SECURITY_EMAIL:-$AUTHOR_EMAIL}}" + + read -rp "Conduct contact email [${CONDUCT_EMAIL:-$AUTHOR_EMAIL}]: " _CONDUCT_EMAIL + CONDUCT_EMAIL="${_CONDUCT_EMAIL:-${CONDUCT_EMAIL:-$AUTHOR_EMAIL}}" + + read -rp "Project type (library|binary|monorepo|service|website) [library]: " PROJECT_TYPE + PROJECT_TYPE="${PROJECT_TYPE:-library}" + + read -rp "Website URL [https://${FORGE}/${OWNER}/${REPO}]: " WEBSITE + WEBSITE="${WEBSITE:-https://${FORGE}/${OWNER}/${REPO}}" + + # --- Derived values --- + PROJECT_UPPER=$(echo "$REPO" | tr '[:lower:]-' '[:upper:]_') + PROJECT_LOWER=$(echo "$REPO" | tr '[:upper:]-' '[:lower:]_') + CURRENT_YEAR=$(date +%Y) + CURRENT_DATE=$(date +%Y-%m-%d) + + # Derive citation name parts (best-effort split on last space) + AUTHOR_LAST="${AUTHOR##* }" + AUTHOR_FIRST="${AUTHOR% *}" + FIRST_INITIAL="${AUTHOR_FIRST:0:1}." + if [ "$AUTHOR_LAST" = "$AUTHOR_FIRST" ]; then + AUTHOR_FIRST="$AUTHOR" + AUTHOR_LAST="" + FIRST_INITIAL="" + fi + + echo "" + echo "── Summary ──────────────────────────────────────" + echo " Project: $PROJECT_NAME" + echo " Repo: $REPO" + echo " Owner: $OWNER" + echo " Author: $AUTHOR <$AUTHOR_EMAIL>" + [ -n "$AUTHOR_ORG" ] && echo " Organization: $AUTHOR_ORG" + echo " Forge: $FORGE" + echo " Year: $CURRENT_YEAR" + echo "────────────────────────────────────────────────" + echo "" + read -rp "Proceed? [Y/n] " CONFIRM + [[ "${CONFIRM:-Y}" =~ ^[Nn] ]] && echo "Aborted." && exit 0 + + echo "" + echo "Replacing placeholders..." + + # Brace tokens as variables (hex avoids just interpolation) + LB=$(printf '\x7b\x7b') + RB=$(printf '\x7d\x7d') + + # Build the sed expression list + # Note: using | as delimiter since URLs contain / + SED_ARGS=( + -e "s|${LB}PROJECT_NAME${RB}|${PROJECT_NAME}|g" + -e "s|${LB}PROJECT_DESCRIPTION${RB}|${PROJECT_DESCRIPTION}|g" + -e "s|${LB}PROJECT${RB}|${PROJECT_UPPER}|g" + -e "s|${LB}project${RB}|${PROJECT_LOWER}|g" + -e "s|${LB}REPO${RB}|${REPO}|g" + -e "s|${LB}OWNER${RB}|${OWNER}|g" + -e "s|${LB}AUTHOR${RB}|${AUTHOR}|g" + -e "s|${LB}AUTHOR_EMAIL${RB}|${AUTHOR_EMAIL}|g" + -e "s|${LB}AUTHOR_ORG${RB}|${AUTHOR_ORG}|g" + -e "s|${LB}AUTHOR_LAST${RB}|${AUTHOR_LAST}|g" + -e "s|${LB}AUTHOR_FIRST${RB}|${AUTHOR_FIRST}|g" + -e "s|${LB}AUTHOR_INITIALS${RB}|${FIRST_INITIAL}|g" + -e "s|${LB}FORGE${RB}|${FORGE}|g" + -e "s|${LB}CURRENT_YEAR${RB}|${CURRENT_YEAR}|g" + -e "s|${LB}CURRENT_DATE${RB}|${CURRENT_DATE}|g" + -e "s|${LB}DATE${RB}|${CURRENT_DATE}|g" + -e "s|${LB}SECURITY_EMAIL${RB}|${SECURITY_EMAIL}|g" + -e "s|${LB}CONDUCT_EMAIL${RB}|${CONDUCT_EMAIL}|g" + -e "s|${LB}LICENSE${RB}|MPL-2.0|g" + -e "s|${LB}CONDUCT_TEAM${RB}|Code of Conduct Committee|g" + -e "s|${LB}RESPONSE_TIME${RB}|48 hours|g" + -e "s|${LB}MAIN_BRANCH${RB}|main|g" + -e "s|${LB}PROJECT_PURPOSE${RB}|${PROJECT_DESCRIPTION}|g" + -e "s|${LB}PROJECT_ROLE${RB}|${PROJECT_TYPE}|g" + -e "s|${LB}PROJECT_TYPE${RB}|${PROJECT_TYPE}|g" + -e "s|${LB}WEBSITE${RB}|${WEBSITE}|g" + ) + [ -n "$AUTHOR_EMAIL_ALT" ] && SED_ARGS+=(-e "s|${LB}AUTHOR_EMAIL_ALT${RB}|${AUTHOR_EMAIL_ALT}|g") + + # Replace in all text files (skip .git, LICENSE text, and binaries) + find . -type f \ + -not -path './.git/*' \ + -not -name 'MPL-2.0.txt' \ + -not -name '*.png' -not -name '*.jpg' -not -name '*.gif' \ + -not -name '*.woff' -not -name '*.woff2' \ + | while read -r file; do + if file --brief "$file" | grep -qi 'text\|ascii\|utf'; then + sed -i "${SED_ARGS[@]}" "$file" + fi + done + + # Also replace [YOUR-REPO-NAME] and [YOUR-NAME/ORG] in AI manifest + sed -i "s|\[YOUR-REPO-NAME\]|${PROJECT_NAME}|g" 0-AI-MANIFEST.a2ml 2>/dev/null || true + sed -i "s|\[YOUR-NAME/ORG\]|${OWNER}|g" 0-AI-MANIFEST.a2ml 2>/dev/null || true + + echo "" + echo "── Validation ───────────────────────────────────" + + # Check for remaining placeholders + PATTERN="${LB}[A-Z_]*${RB}" + REMAINING=$(grep -rl "$PATTERN" . --include='*.md' --include='*.adoc' --include='*.yml' --include='*.a2ml' --include='*.toml' --include='*.scm' --include='*.ncl' --include='*.nix' --include='*.json' 2>/dev/null | grep -v '.git/' | grep -v 'PLACEHOLDERS.md' || true) + if [ -n "$REMAINING" ]; then + echo "WARNING: Remaining placeholders in:" + echo "$REMAINING" | sed 's/^/ /' + echo "" + echo "Run: grep -rn '$LB' . --include='*.md' to inspect" + else + echo "All placeholders replaced successfully!" + fi + + # K9-SVC validation (if available) + if command -v k9-svc >/dev/null 2>&1; then + echo "" + echo "Running k9-svc validation..." + k9-svc validate . 2>/dev/null || true + fi + + echo "" + echo "Done! Next steps:" + echo " 1. Review changes: git diff" + echo " 2. Remove template cruft: rm PLACEHOLDERS.md" + echo " 3. Customize README.adoc for your project" + echo " 4. Commit: git add -A && git commit -m 'feat: initialize from RSR template'" + echo " 5. Push: git remote add origin git@${FORGE}:${OWNER}/${REPO}.git && git push -u origin main" + +# ═══════════════════════════════════════════════════════════════════════════════ +# BUILD & COMPILE +# ═══════════════════════════════════════════════════════════════════════════════ + +# Build the project (debug mode) +build *args: + @echo "Building statistease (debug)..." + # TODO: Replace with your build command + # Examples: + # cargo build {{args}} # Rust + # mix compile {{args}} # Elixir + # zig build {{args}} # Zig + # deno task build {{args}} # Deno/ReScript + @echo "Build complete" + +# Build in release mode with optimizations +build-release *args: + @echo "Building statistease (release)..." + # TODO: Replace with your release build command + # Examples: + # cargo build --release {{args}} + # MIX_ENV=prod mix compile {{args}} + # zig build -Doptimize=ReleaseFast {{args}} + @echo "Release build complete" + +# Build and watch for changes (requires entr or similar) +build-watch: + @echo "Watching for changes..." + # TODO: Customize file patterns for your language + # Examples: + # find src -name '*.rs' | entr -c just build + # mix compile --force --warnings-as-errors + # deno task dev + +# Clean build artifacts [reversible: rebuild with `just build`] +clean: + @echo "Cleaning..." + # TODO: Customize for your build system + rm -rf target/ _build/ build/ dist/ out/ obj/ bin/ + +# Deep clean including caches [reversible: rebuild] +clean-all: clean + rm -rf .cache .tmp + +# ═══════════════════════════════════════════════════════════════════════════════ +# TEST & QUALITY +# ═══════════════════════════════════════════════════════════════════════════════ + +# Run all tests +test *args: + @echo "Running tests..." + julia --project=. test/runtests.jl {{args}} + @echo "Tests passed!" + +# Run tests with verbose output +test-verbose: + @echo "Running tests (verbose)..." + # TODO: Replace with verbose test command + +# Smoke test +test-smoke: + @echo "Smoke test..." + # TODO: Add basic sanity checks + +# Run all quality checks +quality: fmt-check lint test + @echo "All quality checks passed!" + +# Fix all auto-fixable issues [reversible: git checkout] +fix: fmt + @echo "Fixed all auto-fixable issues" + +# ═══════════════════════════════════════════════════════════════════════════════ +# LINT & FORMAT +# ═══════════════════════════════════════════════════════════════════════════════ + +# Format all source files [reversible: git checkout] +fmt: + @echo "Formatting source files..." + # TODO: Replace with your formatter + # Examples: + # cargo fmt + # mix format + # gleam format + # deno fmt + +# Check formatting without changes +fmt-check: + @echo "Checking formatting..." + # TODO: Replace with your format check + # Examples: + # cargo fmt --check + # mix format --check-formatted + # gleam format --check + +# Run linter +lint: + @echo "Linting source files..." + # TODO: Replace with your linter + # Examples: + # cargo clippy -- -D warnings + # mix credo --strict + # gleam check + +# ═══════════════════════════════════════════════════════════════════════════════ +# RUN & EXECUTE +# ═══════════════════════════════════════════════════════════════════════════════ + +# Run the application +run *args: build + # TODO: Replace with your run command + echo "Run not configured yet" + +# Run with verbose output +run-verbose *args: build + # TODO: Replace with verbose run command + echo "Run not configured yet" + +# Install to user path +install: build-release + @echo "Installing statistease..." + # TODO: Replace with your install command + +# ═══════════════════════════════════════════════════════════════════════════════ +# DEPENDENCIES +# ═══════════════════════════════════════════════════════════════════════════════ + +# Install/check all dependencies +deps: + @echo "Checking dependencies..." + # TODO: Replace with your dependency check + # Examples: + # cargo check + # mix deps.get + # gleam deps download + @echo "All dependencies satisfied" + +# Audit dependencies for vulnerabilities +deps-audit: + @echo "Auditing for vulnerabilities..." + # TODO: Replace with your audit command + # Examples: + # cargo audit + # mix audit + @command -v trivy >/dev/null && trivy fs --severity HIGH,CRITICAL --quiet . || true + @command -v gitleaks >/dev/null && gitleaks detect --source . --no-git --quiet || true + @echo "Audit complete" + +# ═══════════════════════════════════════════════════════════════════════════════ +# DOCUMENTATION +# ═══════════════════════════════════════════════════════════════════════════════ + +# Generate all documentation +docs: + @mkdir -p docs/generated docs/man + just cookbook + just man + @echo "Documentation generated in docs/" + +# Generate justfile cookbook documentation +cookbook: + #!/usr/bin/env bash + mkdir -p docs + OUTPUT="docs/just-cookbook.adoc" + echo "= statistease Justfile Cookbook" > "$OUTPUT" + echo ":toc: left" >> "$OUTPUT" + echo ":toclevels: 3" >> "$OUTPUT" + echo "" >> "$OUTPUT" + echo "Generated: $(date -Iseconds)" >> "$OUTPUT" + echo "" >> "$OUTPUT" + echo "== Recipes" >> "$OUTPUT" + echo "" >> "$OUTPUT" + just --list --unsorted | while read -r line; do + if [[ "$line" =~ ^[[:space:]]+([a-z_-]+) ]]; then + recipe="${BASH_REMATCH[1]}" + echo "=== $recipe" >> "$OUTPUT" + echo "" >> "$OUTPUT" + echo "[source,bash]" >> "$OUTPUT" + echo "----" >> "$OUTPUT" + echo "just $recipe" >> "$OUTPUT" + echo "----" >> "$OUTPUT" + echo "" >> "$OUTPUT" + fi + done + echo "Generated: $OUTPUT" + +# Generate man page +man: + #!/usr/bin/env bash + mkdir -p docs/man + cat > docs/man/statistease.1 << EOF + .TH statistease 1 "$(date +%Y-%m-%d)" "{{version}}" "statistease Manual" + .SH NAME + statistease \- RSR-compliant project + .SH SYNOPSIS + .B just + [recipe] [args...] + .SH DESCRIPTION + RSR (Rhodium Standard Repository) project managed with just. + .SH AUTHOR + $(git config user.name 2>/dev/null || echo "Author") <$(git config user.email 2>/dev/null || echo "email")> + EOF + echo "Generated: docs/man/statistease.1" + +# ═══════════════════════════════════════════════════════════════════════════════ +# CONTAINERS (Podman + Wolfi) +# ═══════════════════════════════════════════════════════════════════════════════ + +# Build container image +container-build tag="latest": + @if [ -f Containerfile ]; then \ + podman build -t statistease:{{tag}} -f Containerfile .; \ + else \ + echo "No Containerfile found"; \ + fi + +# Run container +container-run *args: + podman run --rm -it statistease:latest {{args}} + +# Push container image +container-push registry="ghcr.io/hyperpolymath" tag="latest": + podman tag statistease:{{tag}} {{registry}}/statistease:{{tag}} + podman push {{registry}}/statistease:{{tag}} + +# ═══════════════════════════════════════════════════════════════════════════════ +# CI & AUTOMATION +# ═══════════════════════════════════════════════════════════════════════════════ + +# Run full CI pipeline locally +ci: deps quality + @echo "CI pipeline complete!" + +# Install git hooks +install-hooks: + @mkdir -p .git/hooks + @cat > .git/hooks/pre-commit << 'HOOKEOF' + #!/bin/bash + just fmt-check || exit 1 + just lint || exit 1 + HOOKEOF + @chmod +x .git/hooks/pre-commit + @echo "Git hooks installed" + +# ═══════════════════════════════════════════════════════════════════════════════ +# SECURITY +# ═══════════════════════════════════════════════════════════════════════════════ + +# Run security audit +security: deps-audit + @echo "=== Security Audit ===" + @command -v gitleaks >/dev/null && gitleaks detect --source . --verbose || true + @command -v trivy >/dev/null && trivy fs --severity HIGH,CRITICAL . || true + @echo "Security audit complete" + +# Generate SBOM +sbom: + @mkdir -p docs/security + @command -v syft >/dev/null && syft . -o spdx-json > docs/security/sbom.spdx.json || echo "syft not found" + +# ═══════════════════════════════════════════════════════════════════════════════ +# VALIDATION & COMPLIANCE +# ═══════════════════════════════════════════════════════════════════════════════ + +# Validate RSR compliance +validate-rsr: + #!/usr/bin/env bash + echo "=== RSR Compliance Check ===" + MISSING="" + for f in .editorconfig .gitignore Justfile README.adoc LICENSE; do + [ -f "$f" ] || MISSING="$MISSING $f" + done + for f in .machine_readable/STATE.a2ml .machine_readable/META.a2ml .machine_readable/ECOSYSTEM.a2ml; do + [ -f "$f" ] || MISSING="$MISSING $f" + done + if [ -n "$MISSING" ]; then + echo "MISSING:$MISSING" + exit 1 + fi + echo "RSR compliance: PASS" + +# Validate STATE.a2ml syntax +validate-state: + @if [ -f ".machine_readable/STATE.a2ml" ]; then \ + grep -q '^\[metadata\]' .machine_readable/STATE.a2ml && \ + grep -q 'project\s*=' .machine_readable/STATE.a2ml && \ + echo "STATE.a2ml: valid" || echo "STATE.a2ml: INVALID (missing required sections)"; \ + else \ + echo "No .machine_readable/STATE.a2ml found"; \ + fi + +# Validate AI installation guide completeness (finishbot pre-release check) +validate-ai-install: + #!/usr/bin/env bash + echo "=== AI Installation Guide Check ===" + GUIDE="docs/AI_INSTALLATION_GUIDE.adoc" + README="README.adoc" + ERRORS=0 + + # Check guide exists + if [ ! -f "$GUIDE" ]; then + echo "MISSING: $GUIDE (create from template: docs/AI_INSTALLATION_GUIDE.adoc)" + ERRORS=$((ERRORS + 1)) + else + # Check for unfilled TODO markers + TODOS=$(grep -c '\[TODO-AI-INSTALL' "$GUIDE" 2>/dev/null || true) + if [ "$TODOS" -gt 0 ]; then + echo "INCOMPLETE: $GUIDE has $TODOS unfilled [TODO-AI-INSTALL] markers:" + grep -n '\[TODO-AI-INSTALL' "$GUIDE" | head -10 + ERRORS=$((ERRORS + 1)) + else + echo "$GUIDE: complete (no TODO markers)" + fi + + # Check AI implementation section exists + if ! grep -q 'ai-implementation' "$GUIDE" 2>/dev/null; then + echo "MISSING: [[ai-implementation]] anchor in $GUIDE" + ERRORS=$((ERRORS + 1)) + fi + + # Check privacy notice exists + if ! grep -qi 'privacy' "$GUIDE" 2>/dev/null; then + echo "MISSING: Privacy notice in $GUIDE" + ERRORS=$((ERRORS + 1)) + fi + + # Check install commands exist (not just placeholders) + if ! grep -q 'git clone' "$GUIDE" 2>/dev/null; then + echo "WARNING: No git clone command found in $GUIDE -- install commands may be incomplete" + fi + fi + + # Check README has AI install section + if [ -f "$README" ]; then + if ! grep -qi 'AI-Assisted Installation' "$README" 2>/dev/null; then + echo "MISSING: AI-Assisted Installation section in $README" + echo " Copy from docs/AI-INSTALL-README-SECTION.adoc" + ERRORS=$((ERRORS + 1)) + fi + + # Check README for unfilled TODO markers + README_TODOS=$(grep -c '\[TODO-AI-INSTALL' "$README" 2>/dev/null || true) + if [ "$README_TODOS" -gt 0 ]; then + echo "INCOMPLETE: $README has $README_TODOS unfilled [TODO-AI-INSTALL] markers" + ERRORS=$((ERRORS + 1)) + fi + fi + + if [ "$ERRORS" -gt 0 ]; then + echo "" + echo "AI install guide: FAIL ($ERRORS issues)" + exit 1 + fi + echo "AI install guide: PASS" + +# Full validation suite +validate: validate-rsr validate-state validate-ai-install + @echo "All validations passed!" + +# ═══════════════════════════════════════════════════════════════════════════════ +# STATE MANAGEMENT +# ═══════════════════════════════════════════════════════════════════════════════ + +# Update STATE.a2ml timestamp +state-touch: + @if [ -f ".machine_readable/STATE.a2ml" ]; then \ + sed -i 's/last-updated = "[^"]*"/last-updated = "'"$(date +%Y-%m-%d)"'"/' .machine_readable/STATE.a2ml && \ + echo "STATE.a2ml timestamp updated"; \ + fi + +# Show current phase from STATE.a2ml +state-phase: + @grep -oP 'phase\s*=\s*"\K[^"]+' .machine_readable/STATE.a2ml 2>/dev/null | head -1 || echo "unknown" + +# ═══════════════════════════════════════════════════════════════════════════════ +# GUIX & NIX +# ═══════════════════════════════════════════════════════════════════════════════ + +# Enter Guix development shell (primary) +guix-shell: + guix shell -D -f guix.scm + +# Build with Guix +guix-build: + guix build -f guix.scm + +# Enter Nix development shell (fallback) +nix-shell: + @if [ -f "flake.nix" ]; then nix develop; else echo "No flake.nix"; fi + +# ═══════════════════════════════════════════════════════════════════════════════ +# HYBRID AUTOMATION +# ═══════════════════════════════════════════════════════════════════════════════ + +# Run local automation tasks +automate task="all": + #!/usr/bin/env bash + case "{{task}}" in + all) just fmt && just lint && just test && just docs && just state-touch ;; + cleanup) just clean && find . -name "*.orig" -delete && find . -name "*~" -delete ;; + update) just deps && just validate ;; + *) echo "Unknown: {{task}}. Use: all, cleanup, update" && exit 1 ;; + esac + +# ═══════════════════════════════════════════════════════════════════════════════ +# COMBINATORIC MATRIX RECIPES +# ═══════════════════════════════════════════════════════════════════════════════ + +# Build matrix: [debug|release] x [target] x [features] +build-matrix mode="debug" target="" features="": + @echo "Build matrix: mode={{mode}} target={{target}} features={{features}}" + +# Test matrix: [unit|integration|e2e|all] x [verbosity] x [parallel] +test-matrix suite="unit" verbosity="normal" parallel="true": + @echo "Test matrix: suite={{suite}} verbosity={{verbosity}} parallel={{parallel}}" + +# Container matrix: [build|run|push|shell|scan] x [registry] x [tag] +container-matrix action="build" registry="ghcr.io/hyperpolymath" tag="latest": + @echo "Container matrix: action={{action}} registry={{registry}} tag={{tag}}" + +# CI matrix: [lint|test|build|security|all] x [quick|full] +ci-matrix stage="all" depth="quick": + @echo "CI matrix: stage={{stage}} depth={{depth}}" + +# Show all matrix combinations +combinations: + @echo "=== Combinatoric Matrix Recipes ===" + @echo "" + @echo "Build Matrix: just build-matrix [debug|release] [target] [features]" + @echo "Test Matrix: just test-matrix [unit|integration|e2e|all] [verbosity] [parallel]" + @echo "Container: just container-matrix [build|run|push|shell|scan] [registry] [tag]" + @echo "CI Matrix: just ci-matrix [lint|test|build|security|all] [quick|full]" + +# ═══════════════════════════════════════════════════════════════════════════════ +# VERSION CONTROL +# ═══════════════════════════════════════════════════════════════════════════════ + +# Show git status +status: + @git status --short + +# Show recent commits +log count="20": + @git log --oneline -{{count}} + +# Generate CHANGELOG.md with git-cliff +changelog: + @command -v git-cliff >/dev/null || { echo "git-cliff not found — install: cargo install git-cliff"; exit 1; } + git cliff --output CHANGELOG.md + @echo "Generated CHANGELOG.md" + +# Preview changelog for unreleased commits (does not write) +changelog-preview: + @command -v git-cliff >/dev/null || { echo "git-cliff not found — install: cargo install git-cliff"; exit 1; } + git cliff --unreleased --strip header + +# Tag a new release (usage: just release-tag 1.2.3) +release-tag version: + #!/usr/bin/env bash + TAG="v{{version}}" + if git rev-parse "$TAG" >/dev/null 2>&1; then + echo "Tag $TAG already exists" + exit 1 + fi + just changelog + git add CHANGELOG.md + git commit -m "chore(release): prepare $TAG" + git tag -a "$TAG" -m "Release $TAG" + echo "Created tag $TAG — push with: git push origin main --tags" + +# ═══════════════════════════════════════════════════════════════════════════════ +# UTILITIES +# ═══════════════════════════════════════════════════════════════════════════════ + +# Count lines of code +loc: + @find . \( -name "*.rs" -o -name "*.ex" -o -name "*.exs" -o -name "*.res" -o -name "*.gleam" -o -name "*.zig" -o -name "*.idr" -o -name "*.hs" -o -name "*.ncl" -o -name "*.scm" -o -name "*.adb" -o -name "*.ads" \) -not -path './target/*' -not -path './_build/*' 2>/dev/null | xargs wc -l 2>/dev/null | tail -1 || echo "0" + +# Show TODO comments +todos: + @grep -rn "TODO\|FIXME\|HACK\|XXX" --include="*.rs" --include="*.ex" --include="*.res" --include="*.gleam" --include="*.zig" --include="*.idr" --include="*.hs" . 2>/dev/null || echo "No TODOs" + +# Open in editor +edit: + ${EDITOR:-code} . + +# Run panic-attacker pre-commit scan +assail: + @command -v panic-attack >/dev/null 2>&1 && panic-attack assail . || echo "panic-attack not found — install from https://github.com/hyperpolymath/panic-attacker" + +# Self-diagnostic — checks dependencies, permissions, paths +doctor: + @echo "Running diagnostics for statistease..." + @echo "Checking required tools..." + @command -v just >/dev/null 2>&1 && echo " [OK] just" || echo " [FAIL] just not found" + @command -v git >/dev/null 2>&1 && echo " [OK] git" || echo " [FAIL] git not found" + @echo "Checking for hardcoded paths..." + @grep -rn '$HOME\|$ECLIPSE_DIR' --include='*.rs' --include='*.ex' --include='*.res' --include='*.gleam' --include='*.sh' . 2>/dev/null | head -5 || echo " [OK] No hardcoded paths" + @echo "Diagnostics complete." + +# Auto-repair common issues +heal: + @echo "Attempting auto-repair for statistease..." + @echo "Fixing permissions..." + @find . -name "*.sh" -exec chmod +x {} \; 2>/dev/null || true + @echo "Cleaning stale caches..." + @rm -rf .cache/stale 2>/dev/null || true + @echo "Repair complete." + +# Guided tour of key features +tour: + @echo "=== statistease Tour ===" + @echo "" + @echo "1. Project structure:" + @ls -la + @echo "" + @echo "2. Available commands: just --list" + @echo "" + @echo "3. Read README.adoc for full overview" + @echo "4. Read EXPLAINME.adoc for architecture decisions" + @echo "5. Run 'just doctor' to check your setup" + @echo "" + @echo "Tour complete! Try 'just --list' to see all available commands." + +# Open feedback channel with diagnostic context +help-me: + @echo "=== statistease Help ===" + @echo "Platform: $(uname -s) $(uname -m)" + @echo "Shell: $SHELL" + @echo "" + @echo "To report an issue:" + @echo " https://github.com/hyperpolymath/statistease/issues/new" + @echo "" + @echo "Include the output of 'just doctor' in your report." + + +# Print the current CRG grade (reads from READINESS.md '**Current Grade:** X' line) +crg-grade: + @grade=$$(grep -oP '(?<=\*\*Current Grade:\*\* )[A-FX]' READINESS.md 2>/dev/null | head -1); \ + [ -z "$$grade" ] && grade="X"; \ + echo "$$grade" + +# Generate a shields.io badge markdown for the current CRG grade +# Looks for '**Current Grade:** X' in READINESS.md; falls back to X +crg-badge: + @grade=$$(grep -oP '(?<=\*\*Current Grade:\*\* )[A-FX]' READINESS.md 2>/dev/null | head -1); \ + [ -z "$$grade" ] && grade="X"; \ + case "$$grade" in \ + A) color="brightgreen" ;; B) color="green" ;; C) color="yellow" ;; \ + D) color="orange" ;; E) color="red" ;; F) color="critical" ;; \ + *) color="lightgrey" ;; esac; \ + echo "[![CRG $$grade](https://img.shields.io/badge/CRG-$$grade-$$color?style=flat-square)](https://github.com/hyperpolymath/standards/tree/main/component-readiness-grades)" diff --git a/.machine_readable/contractiles/Mustfile.a2ml b/.machine_readable/contractiles/Mustfile.a2ml new file mode 100644 index 0000000..55f8ab4 --- /dev/null +++ b/.machine_readable/contractiles/Mustfile.a2ml @@ -0,0 +1,102 @@ +# SPDX-License-Identifier: MPL-2.0 +# Mustfile — Physical state contract for rsr-template-repo +# Author: Jonathan D.A. Jewell +# +# What MUST be true about this repository. Hard requirements. +# Run with: must check +# Fix with: must fix (where a deterministic fix exists) + +@abstract: +Physical-state invariants for rsr-template-repo. This is the canonical +RSR template repository. These are hard requirements — CI and pre-commit +hooks fail if any check fails. +@end + +## File Presence + +### license-present +- description: LICENSE file must exist +- run: test -f LICENSE +- severity: critical + +### readme-present +- description: README.adoc must exist +- run: test -f README.adoc +- severity: critical + +### security-policy +- description: SECURITY.md must exist +- run: test -f SECURITY.md +- severity: critical + +### ai-manifest +- description: 0-AI-MANIFEST.a2ml must exist +- run: test -f 0-AI-MANIFEST.a2ml +- severity: critical + +### governance-docs +- description: GOVERNANCE.adoc, MAINTAINERS.adoc, CODEOWNERS must exist +- run: test -f GOVERNANCE.adoc && test -f MAINTAINERS.adoc && test -f .github/CODEOWNERS +- severity: critical + +### machine-readable-dir +- description: .machine_readable/ directory must exist +- run: test -d .machine_readable +- severity: critical + +## Directory Structure + +### contractiles-complete +- description: All required contractile directories exist +- run: test -d .machine_readable/contractiles && test -d .machine_readable/contractiles/bust && test -d .machine_readable/contractiles/dust +- severity: critical + +### contractiles-files-present +- description: All four primary contractile files exist +- run: test -f .machine_readable/contractiles/Intentfile.a2ml && test -f .machine_readable/contractiles/Mustfile.a2ml && test -f .machine_readable/contractiles/Trustfile.a2ml && test -f .machine_readable/contractiles/Adjustfile.a2ml +- severity: critical + +### bust-dust-files-present +- description: Bustfile and Dustfile exist in their directories +- run: test -f .machine_readable/contractiles/bust/Bustfile.a2ml && test -f .machine_readable/contractiles/dust/Dustfile.a2ml +- severity: critical + +### six-directory-present +- description: 6a2 directory exists with required files +- run: test -d .machine_readable/6a2 && test -f .machine_readable/6a2/META.a2ml && test -f .machine_readable/6a2/ECOSYSTEM.a2ml && test -f .machine_readable/6a2/STATE.a2ml && test -f .machine_readable/6a2/PLAYBOOK.a2ml && test -f .machine_readable/6a2/AGENTIC.a2ml && test -f .machine_readable/6a2/NEUROSYM.a2ml +- severity: critical + +### anchors-directory +- description: anchors directory exists in 6a2 +- run: test -d .machine_readable/6a2/anchors +- severity: warning + +### self-validating-structure +- description: self-validating directory has k9-svc and examples +- run: test -d .machine_readable/self-validating && test -d .machine_readable/self-validating/k9-svc && test -d .machine_readable/self-validating/examples +- severity: warning + +## Template Integrity + +### no-placeholder-values +- description: No placeholder values remain in template files +- run: test -z "$(grep -r '{{' .machine_readable/contractiles/ 2>/dev/null)" +- severity: critical +- notes: All placeholders must be substituted when copying this template + +### template-readonly +- description: Template marker files are not modified +- run: grep -q 'RSR_TEMPLATE_DO_NOT_EDIT' .machine_readable/0.1-AI-MANIFEST.a2ml +- severity: warning + +## Git State + +### no-untracked-contractiles +- description: All contractile files are tracked in git +- run: test -z "$(git ls-files -o --exclude-standard .machine_readable/contractiles/ 2>/dev/null)" +- severity: critical + +### signed-commits +- description: All commits must be signed +- run: git verify-commit HEAD +- severity: critical diff --git a/.machine_readable/contractiles/Trustfile.a2ml b/.machine_readable/contractiles/Trustfile.a2ml new file mode 100644 index 0000000..e2028b5 --- /dev/null +++ b/.machine_readable/contractiles/Trustfile.a2ml @@ -0,0 +1,88 @@ +# SPDX-License-Identifier: MPL-2.0 +# Trustfile — Trust boundaries and integrity invariants for rsr-template-repo +# Author: Jonathan D.A. Jewell +# +# Defines what LLM/SLM agents are trusted to do without asking, and +# integrity invariants that verify the repo has not been tampered with. + +@abstract: +Trust boundaries and integrity checks for rsr-template-repo. This file +combines the trust-level definitions from the original TRUST.contractile +with the integrity invariants from the old Trustfile.a2ml. It defines +what AI agents may do autonomously and what requires human approval, +plus checks that verify repository integrity. +@end + +## Trust Levels + +The rsr-template-repo operates at trust level: maximal + +Trust levels: +- maximal: Agent may read, build, test, lint, format, heal freely. + Only destructive/external actions require approval. +- standard: Agent may read and build. Test/lint need approval. +- restricted: Agent may read only. All modifications need approval. +- minimal: Agent may read specific files only. Everything else blocked. + +Current trust level: maximal + +## Integrity Invariants + +### Secrets + +#### no-secrets-committed +- description: No credential files in repo +- run: test ! -f .env && test ! -f credentials.json && test ! -f .env.local && test ! -f .env.production +- severity: critical + +#### no-private-keys +- description: No private key files committed +- run: "! find . -name '*.pem' -o -name '*.key' -o -name 'id_rsa' -o -name 'id_ed25519' 2>/dev/null | grep -v node_modules | head -1 | grep -q ." +- severity: critical + +#### no-tokens-in-source +- description: No hardcoded API tokens in source +- run: "! grep -rE '(api[_-]?key|secret|token|password)\s*[:=]\s*[\"'\\''][A-Za-z0-9]{16,}' --include='*.js' --include='*.ts' --include='*.res' --include='*.py' . 2>/dev/null | grep -v node_modules | head -1 | grep -q ." +- severity: critical + +## Provenance + +#### author-correct +- description: Git author matches expected identity +- run: "git log -1 --format='%ae' | grep -qE '(hyperpolymath|j\\.d\\.a\\.jewell)'" +- severity: warning + +#### license-content +- description: LICENSE contains expected identifier +- run: grep -q 'PMPL\|MPL\|MIT\|Apache\|LGPL' LICENSE +- severity: warning + +## Template-Specific Trust + +### template-files-readonly +- description: Template scaffold files should not be modified except by maintainer +- run: test -z "$(git status --short .machine_readable/ 2>/dev/null | grep -v '^??' || true)" +- severity: advisory +- notes: Changes to template files require careful review + +### trust-deny-areas +- description: Sensitive areas from INTENT.contractile require explicit approval +- run: echo "Check .machine_readable/ contractiles and governance docs" +- severity: advisory +- areas: + - .machine_readable/ + - GOVERNANCE.adoc + - MAINTAINERS.adoc + - .github/CODEOWNERS + +## Container Security + +#### container-images-pinned +- description: Containerfile uses pinned base images +- run: test ! -f Containerfile || grep -q 'cgr.dev\|@sha256:' Containerfile +- severity: warning + +#### no-dockerfile +- description: No Dockerfile (use Containerfile) +- run: test ! -f Dockerfile +- severity: warning diff --git a/.machine_readable/contractiles/bust/Bustfile.a2ml b/.machine_readable/contractiles/bust/Bustfile.a2ml deleted file mode 100644 index 63c6d71..0000000 --- a/.machine_readable/contractiles/bust/Bustfile.a2ml +++ /dev/null @@ -1,28 +0,0 @@ -// Bustfile.a2ml — meta-repo bust contractile (breakage / rollback) -// SPDX-License-Identifier: MPL-2.0 - -Bust { - name: "statistease" - version: "1.0.0" - description: "Rollback procedures when something breaks in the meta-repo" - - scenarios: { - "bad-pointer-bump": "git revert in meta-repo; child repo itself untouched" - "submodule-pointer-points-at-missing-sha": "git submodule update --init --checkout resets child to parent-recorded SHA; OR revert the stale bump commit" - "submodule-orphan-after-local-only-commit": "roll back locally with git reset to before the stranded commit; fix remote situation before re-attempting" - "accidental-private-repo-content-leaked-to-public-submodule": "hard-rotate the leaked secret immediately; git-filter-repo or BFG on the submodule's own history; public re-publication only after rotation complete" - } - - escalation-ladder: [ - "1. revert the meta-repo commit (reversible, low blast radius)", - "2. reset the local submodule clone (affects only local workspace)", - "3. force-push to main — PROHIBITED without explicit user confirmation (violates branch protection)", - "4. registry-level (delete/archive the GitHub repo) — human-only action, never by AI" - ] - - backup-points: [ - "GitHub serves as the durable backup for every submodule's own history", - "Meta-repo history on origin/main is the durable backup for pointer state", - "Local backup tags (backup/pre--) retained on risky rewrites" - ] -} diff --git a/.machine_readable/contractiles/bust/bust.ncl b/.machine_readable/contractiles/bust/bust.ncl deleted file mode 100644 index fc8cb8c..0000000 --- a/.machine_readable/contractiles/bust/bust.ncl +++ /dev/null @@ -1,66 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Bust — error-handling / failure-recovery runner -# -# Pairs with: Bustfile.a2ml (same directory) -# Verb: bust -# Semantics: every declared failure mode must have a recovery path that has -# been exercised. Runner injects failures (via declared probes) -# and verifies the recovery path works. Hard gate on any -# failure-mode with missing or broken recovery. -# CLI: `contractile bust check` → list failure modes + recovery status -# `contractile bust drill` → inject declared failures, verify recovery -# -# Anything else in this directory is human-only notes/archive; machines ignore. -# -# Base: ../_base.ncl provides pedigree_schema, run_defaults, probe_schema. -# See: docs/CONTRACTILE-SPEC.adoc - -let base = import "../_base.ncl" in - -{ - pedigree = base.pedigree_schema & { - contractile_verb = "bust", - semantics = "error handling + failure recovery", - security = { - leash = 'Kennel, - trust_level = "controlled failure injection; scoped to system-under-test", - allow_network = false, - allow_filesystem_write = true, # drills may write transient state (tmp dirs, test DBs) - allow_subprocess = true, - injection_scope = "system-under-test-only", - }, - metadata = { - name = "bust-runner", - version = "1.0.0", - description = "Exercises declared failure modes and verifies recovery paths. Hard-gates on any failure mode without working recovery.", - paired_xfile = "Bustfile.a2ml", - author = "Jonathan D.A. Jewell ", - }, - }, - - schema = { - failure_modes - | Array { - id | String, - description | String, - class | [| 'network, 'disk_full, 'oom, 'timeout, 'partial_write, 'panic, 'crash, 'rollback, 'concurrency |], - # TODO: migrate to base.probe_schema (structured probe) when CLI supports it - injection_probe | String, # command that deterministically causes this failure - # TODO: migrate to base.probe_schema (structured probe) when CLI supports it - recovery_probe | String, # command that verifies recovery (exit 0 = recovered) - expected_recovery_time_seconds | Number | default = 30, - # status_core values: 'declared, 'verified, 'failing; bust adds 'drilled - status | [| 'declared, 'drilled, 'verified, 'failing |] | default = 'declared, - notes | String | optional, - }, - }, - - # Runner behaviour — inherits from base.run_defaults. - # bust adds record_recovery_times for performance tier feeding. - run = base.run_defaults & { - on_any_fail = "exit-nonzero", # missing or broken recovery blocks merge - report_format = "a2ml", - emit_summary = true, - record_recovery_times = true, # feeds the performance tier - }, -} diff --git a/.machine_readable/contractiles/dust/Dustfile b/.machine_readable/contractiles/dust/Dustfile deleted file mode 100644 index 314903c..0000000 --- a/.machine_readable/contractiles/dust/Dustfile +++ /dev/null @@ -1,29 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Dustfile template - recovery and rollback semantics - -version: 1 - -recovery: - logs: - - name: decision-log - path: logs/decisions.json - reversible: true - handler: "log-replay --reverse logs/decisions.json" - - policy: - - name: policy-rollback - path: policy/policy.ncl - rollback: "git checkout HEAD~1 -- policy/policy.ncl" - notes: "Rollback policy to the previous known-good revision." - - gateway: - - name: bad-deployment - event: "deploy.failure" - undo: "kubectl rollout undo deployment/gateway" - notes: "Undo a failed deployment while preserving audit logs." - - dust-events: - - name: decision-log-to-dust - source: logs/decisions.json - transform: "dustify --input logs/decisions.json --output logs/dust-events.json" - notes: "Map gateway decision logs into reversible dust events." diff --git a/.machine_readable/contractiles/dust/Dustfile.a2ml b/.machine_readable/contractiles/dust/Dustfile.a2ml deleted file mode 100644 index 0d619ee..0000000 --- a/.machine_readable/contractiles/dust/Dustfile.a2ml +++ /dev/null @@ -1,22 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Dustfile — Cleanup and Hygiene Contract - -[dustfile] -version = "1.0.0" -format = "a2ml" - -[cleanup] -stale-branch-policy = "delete-after-merge" -artifact-retention = "90-days" -cache-policy = "clear-on-release" - -[hygiene] -linting = "required" -formatting = "required" -dead-code-removal = "encouraged" -todo-tracking = "tracked-in-issues" - -[reversibility] -backup-before-destructive = true -rollback-mechanism = "git-revert" -data-retention-policy = "preserve-30-days" diff --git a/.machine_readable/contractiles/must/Mustfile b/.machine_readable/contractiles/must/Mustfile deleted file mode 100644 index dc7b3be..0000000 --- a/.machine_readable/contractiles/must/Mustfile +++ /dev/null @@ -1,35 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Mustfile - declarative state contract (template) -# See: https://github.com/hyperpolymath/mustfile - -version: 1 - -metadata: - name: project-state-contract - spec: v0.0.1 - description: "Invariant checks for config, policy, gateway, logs, and schema." - -parameters: - gateway_port: "8080" - schema_version: "v0.0.1" - -checks: - - name: config-valid - description: "config/service.yaml must be valid." - run: "yq -e '.' config/service.yaml >/dev/null" - - - name: policy-compiles - description: "policy/policy.ncl must compile." - run: "nickel check policy/policy.ncl" - - - name: gateway-exposes-port - description: "Service must expose the configured port." - run: "bash -uc 'ss -lnt | rg \":${GATEWAY_PORT:-8080}\"'" - - - name: logs-are-json - description: "Logs must be JSON." - run: "bash -uc 'rg --files -g \"*.json\" logs | xargs -r jq -e .'" - - - name: schema-version-matches - description: "Schema must match version spec." - run: "bash -uc 'rg -n \"${SCHEMA_VERSION:-v0.0.1}\" schema'" diff --git a/.machine_readable/contractiles/trust/Trustfile.a2ml b/.machine_readable/contractiles/trust/Trustfile.a2ml deleted file mode 100644 index ede6c40..0000000 --- a/.machine_readable/contractiles/trust/Trustfile.a2ml +++ /dev/null @@ -1,82 +0,0 @@ -# SPDX-License-Identifier: PMLP-1.0-or-later -# ============================================================================= -# A2ML Trustfile Template (Cyber-Resilient Baseline) -# Replace all {{PLACEHOLDERS}} for each derived repository. -# ============================================================================= - ---- -### [META] -id: "did:web:{{DOMAIN}}" -version: "{{TRUSTFILE_VERSION}}" -context: - - "https://a2ml.org/ns/v2" - - "https://leanprover-community.github.io/lean4" - - "https://hypatia.scans/ns/v1" - - "https://w3id.org/security/v4" -meta: - generated: "{{GENERATED_AT}}" - expires: "{{EXPIRES_AT}}" - signature: - algorithm: "Ed448+Dilithium5" - value: "{{PRIMARY_SIGNATURE}}" - signedBy: "did:web:{{DOMAIN}}#primary-sig" - fallbackSignature: - algorithm: "SPHINCS+" - value: "{{FALLBACK_SIGNATURE}}" - integrity: - sha3-512: "{{SHA3_512}}" - shake256: "{{SHAKE256}}" - zonemd: "{{ZONEMD}}" - ---- -### [TRUSTFILE] -issuer: "did:web:{{DOMAIN}}" -keys: - - id: "#primary-sig" - type: "HybridKey2024" - classical: - algorithm: "Ed448" - publicKeyJwk: - kty: "OKP" - crv: "Ed448" - x: "{{ED448_PUBLIC_KEY}}" - postQuantum: - algorithm: "Dilithium5" - publicKeyJwk: - kty: "OKP" - crv: "Dilithium5" - x: "{{DILITHIUM5_PUBLIC_KEY}}" - fallback: - algorithm: "SPHINCS+" - publicKeyJwk: - kty: "OKP" - crv: "SPHINCS+" - x: "{{SPHINCS_PLUS_PUBLIC_KEY}}" - -algorithms: - hashing: ["SHA3-512", "SHAKE256", "BLAKE3"] - kdf: "HKDF-SHAKE512" - rng: "ChaCha20-DRBG" - ---- -### [CI_CD] -github_actions: - workflow: ".github/workflows/trustfile.yml" - checks: - - "a2ml validate {{TRUSTFILE_PATH}}" - - "lake build && lake exectest" - - "hypatia scan --config hypatia.yml" - -gitbot_fleet: - hooks: - - type: "pre-commit" - script: "a2ml validate {{TRUSTFILE_PATH}}" - - type: "post-merge" - script: "gitbot-fleet diff --file {{TRUSTFILE_PATH}}" - ---- -### [DEPLOYMENT] -steps: - - "Replace all placeholders." - - "Generate proofs and signatures." - - "Validate trustfile and commit." diff --git a/contractiles/dust/Dustfile.a2ml b/contractiles/dust/Dustfile.a2ml deleted file mode 100644 index bea4090..0000000 --- a/contractiles/dust/Dustfile.a2ml +++ /dev/null @@ -1,20 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Dustfile (A2ML Canonical) - -@abstract: -Recovery and rollback paths for statistease. -Declares how to undo significant state changes. -@end - -@requires: -- section: Source -@end - -## Source - -### source-rollback -- description: Revert all source changes to last commit -- rollback: git checkout HEAD -- . -- blast_radius: file -- precondition: git stash -- notes: Stashes uncommitted work before reverting diff --git a/contractiles/must/Mustfile.a2ml b/contractiles/must/Mustfile.a2ml deleted file mode 100644 index 88e5ea6..0000000 --- a/contractiles/must/Mustfile.a2ml +++ /dev/null @@ -1,33 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Mustfile (A2ML Canonical) - -@abstract: -Physical State contract for statistease. -Declares what must be true about this project's files and configuration. -@end - -@requires: -- section: Checks -@end - -## Checks - -### license-present -- description: LICENSE file must exist -- run: test -f LICENSE -- severity: critical - -### readme-present -- description: README must exist -- run: test -f README.adoc || test -f README.md -- severity: critical - -### spdx-headers -- description: Source files should have SPDX license headers -- run: find . -name '*.rs' -o -name '*.res' -o -name '*.gleam' | head -20 | xargs -r grep -L 'SPDX-License-Identifier' | wc -l | grep -q '^0$' -- severity: warning - -### no-banned-files -- description: No Dockerfiles or Makefiles -- run: test ! -f Dockerfile && test ! -f Makefile -- severity: critical diff --git a/contractiles/trust/Trustfile.a2ml b/contractiles/trust/Trustfile.a2ml deleted file mode 100644 index bca6de1..0000000 --- a/contractiles/trust/Trustfile.a2ml +++ /dev/null @@ -1,27 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Trustfile (A2ML Canonical) - -@abstract: -Integrity and provenance verification for statistease. -@end - -@requires: -- section: Verifications -@end - -## Verifications - -### license-content -- description: LICENSE contains expected SPDX identifier -- command: grep -q 'SPDX\|License\|MIT\|Apache\|PMPL\|MPL' LICENSE -- severity: warning - -### no-secrets-committed -- description: No .env or credential files in repo -- command: test ! -f .env && test ! -f credentials.json && test ! -f .env.local -- severity: critical - -### container-images-pinned -- description: Containerfile base images use pinned digests -- command: test ! -f Containerfile || grep -q '@sha256:' Containerfile -- severity: warning diff --git a/flake.nix b/flake.nix deleted file mode 100644 index 70b6c81..0000000 --- a/flake.nix +++ /dev/null @@ -1,170 +0,0 @@ -# SPDX-License-Identifier: MPL-2.0 -# Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) -# -# Nix flake for StatistEase -# -# NOTE: guix.scm is the PRIMARY development environment. This flake is provided -# as a FALLBACK for contributors who use Nix instead of Guix. The .envrc checks -# for Guix first, then falls back to Nix. -# -# Usage: -# nix develop # Enter development shell -# nix build # Build the project -# nix flake check # Run checks -# nix flake show # Show flake outputs -# -# With direnv (.envrc already configured): -# direnv allow # Auto-enters shell on cd -# -# TODO: Replace StatistEase and {{PROJECT_DESCRIPTION}} with actual values. - -{ - description = "StatistEase — RSR-compliant project"; - - inputs = { - nixpkgs.url = "github:NixOS/nixpkgs/nixpkgs-unstable"; - flake-utils.url = "github:numtide/flake-utils"; - }; - - outputs = { self, nixpkgs, flake-utils }: - flake-utils.lib.eachSystem [ "x86_64-linux" "aarch64-linux" ] (system: - let - pkgs = import nixpkgs { inherit system; }; - - # Common development tools present in every RSR project. - commonTools = with pkgs; [ - git - just - nickel - curl - bash - coreutils - ]; - - # --------------------------------------------------------------- - # Language-specific packages: uncomment the stacks you need. - # --------------------------------------------------------------- - # - # Rust: - # rustc cargo clippy rustfmt rust-analyzer - # - # Elixir: - # elixir erlang - # - # Gleam: - # gleam erlang - # - # Zig: - # zig zls - # - # Haskell: - # ghc cabal-install haskell-language-server - # - # Idris2: - # idris2 - # - # OCaml: - # ocaml dune_3 ocaml-lsp - # - # ReScript (via Deno): - # deno - # - # Julia: - # julia - # - # Ada/SPARK: - # gnat gprbuild - # - # --------------------------------------------------------------- - languageTools = with pkgs; [ - # TODO: Uncomment or add packages for your stack. - # Example for a Rust project: - # rustc - # cargo - # clippy - # rustfmt - # rust-analyzer - ]; - - in - { - # --------------------------------------------------------------- - # Development shell — `nix develop` - # --------------------------------------------------------------- - devShells.default = pkgs.mkShell { - name = "StatistEase-dev"; - - buildInputs = commonTools ++ languageTools; - - # Environment variables available inside the shell. - env = { - PROJECT_NAME = "StatistEase"; - RSR_TIER = "infrastructure"; - }; - - shellHook = '' - echo "" - echo " StatistEase — development shell" - echo " Nix: $(nix --version 2>/dev/null || echo 'unknown')" - echo " Just: $(just --version 2>/dev/null || echo 'not found')" - echo "" - echo " Run 'just' to see available recipes." - echo "" - - # Source .envrc manually when direnv is not managing the shell. - # This keeps project env vars (PROJECT_NAME, DATABASE_URL, etc.) - # consistent whether you enter via 'nix develop' or 'direnv allow'. - if [ -z "''${DIRENV_IN_ENVRC:-}" ] && [ -f .envrc ]; then - # Only source the non-nix parts to avoid recursion. - export PROJECT_NAME="StatistEase" - export RSR_TIER="infrastructure" - if [ -f .env ]; then - set -a - . .env - set +a - fi - fi - ''; - }; - - # --------------------------------------------------------------- - # Package — `nix build` - # --------------------------------------------------------------- - packages.default = pkgs.stdenv.mkDerivation { - pname = "StatistEase"; - version = "0.1.0"; - - src = self; - - # TODO: Replace with real build instructions. - # Examples: - # - # Rust (use rustPlatform.buildRustPackage instead of stdenv): - # packages.default = pkgs.rustPlatform.buildRustPackage { ... }; - # - # Elixir (use mixRelease): - # packages.default = pkgs.beamPackages.mixRelease { ... }; - # - # Zig: - # buildPhase = "zig build -Doptimize=ReleaseSafe"; - - buildPhase = '' - echo "TODO: Add build commands for StatistEase" - ''; - - installPhase = '' - mkdir -p $out/share/doc - cp README.adoc $out/share/doc/ 2>/dev/null || true - ''; - - meta = with pkgs.lib; { - description = "{{PROJECT_DESCRIPTION}}"; - homepage = "https://github.com/hyperpolymath/StatistEase"; - license = licenses.mpl20; # MPL-2.0 extends MPL-2.0 - maintainers = []; - platforms = [ "x86_64-linux" "aarch64-linux" ]; - }; - }; - } - ); -} From b0a87ea795d1f3faaba832c1bec555e031f40cd7 Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Thu, 11 Jun 2026 22:15:51 +0100 Subject: [PATCH 09/11] security: standardize secret scanning on TruffleHog --- .github/workflows/boj-build.yml | 2 - .github/workflows/casket-pages.yml | 13 --- .github/workflows/codeql.yml | 7 -- .github/workflows/dependabot-automerge.yml | 12 +-- .github/workflows/e2e.yml | 20 +--- .github/workflows/governance.yml | 4 - .github/workflows/hypatia-scan.yml | 107 +++------------------ .github/workflows/mirror.yml | 24 ----- .github/workflows/release.yml | 25 +---- .github/workflows/scorecard-enforcer.yml | 14 +-- .github/workflows/scorecard.yml | 5 - .github/workflows/secret-scanner.yml | 22 +---- .gitlab-ci.yml | 31 +----- .machine_readable/contractiles/Justfile | 5 +- Justfile | 5 +- 15 files changed, 37 insertions(+), 259 deletions(-) diff --git a/.github/workflows/boj-build.yml b/.github/workflows/boj-build.yml index 5ba12d0..4c6434a 100644 --- a/.github/workflows/boj-build.yml +++ b/.github/workflows/boj-build.yml @@ -4,10 +4,8 @@ on: push: branches: [main, master] workflow_dispatch: - permissions: contents: read - jobs: trigger-boj: runs-on: ubuntu-latest diff --git a/.github/workflows/casket-pages.yml b/.github/workflows/casket-pages.yml index 87c1e3f..d9a1d6d 100644 --- a/.github/workflows/casket-pages.yml +++ b/.github/workflows/casket-pages.yml @@ -1,20 +1,16 @@ # SPDX-License-Identifier: MPL-2.0 name: GitHub Pages - on: push: branches: [main, master] workflow_dispatch: - permissions: contents: read pages: write id-token: write - concurrency: group: "pages" cancel-in-progress: false - jobs: build: runs-on: ubuntu-latest @@ -22,19 +18,16 @@ jobs: steps: - name: Checkout uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4 - - name: Checkout casket-ssg uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4 with: repository: hyperpolymath/casket-ssg path: .casket-ssg - - name: Setup GHCup uses: haskell-actions/setup@ec49483bfc012387b227434aba94f59a6ecd0900 # v2 with: ghc-version: '9.8.2' cabal-version: '3.10' - - name: Cache Cabal uses: actions/cache@0057852bfaa89a56745cba8c7296529d2fc39830 # v4 with: @@ -43,11 +36,9 @@ jobs: ~/.cabal/store .casket-ssg/dist-newstyle key: ${{ runner.os }}-casket-${{ hashFiles('.casket-ssg/casket-ssg.cabal') }} - - name: Build casket-ssg working-directory: .casket-ssg run: cabal build - - name: Prepare site source shell: bash run: | @@ -90,21 +81,17 @@ jobs: echo "Project-specific site content can be added later under site/." } > .site-src/index.md fi - - name: Build site run: | mkdir -p _site cd .casket-ssg && cabal run casket-ssg -- build ../.site-src ../_site touch ../_site/.nojekyll - - name: Setup Pages uses: actions/configure-pages@983d7736d9b0ae728b81ab479565c72886d7745b # v5 - - name: Upload artifact uses: actions/upload-pages-artifact@56afc609e74202658d3ffba0e8f6dda462b719fa # v3 with: path: '_site' - deploy: environment: name: github-pages diff --git a/.github/workflows/codeql.yml b/.github/workflows/codeql.yml index e547933..64a6a75 100644 --- a/.github/workflows/codeql.yml +++ b/.github/workflows/codeql.yml @@ -1,6 +1,5 @@ # SPDX-License-Identifier: MPL-2.0 name: CodeQL Security Analysis - on: push: branches: [main, master] @@ -8,7 +7,6 @@ on: branches: [main, master] schedule: - cron: '0 6 * * 1' - # Estate guardrail: cancel superseded runs so re-pushes / rebased PR # updates do not pile up queued runs against the shared account-wide # Actions concurrency pool. Applied only to read-only check workflows @@ -16,10 +14,8 @@ on: concurrency: group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: true - permissions: contents: read - jobs: analyze: runs-on: ubuntu-latest @@ -33,17 +29,14 @@ jobs: include: - language: javascript-typescript build-mode: none - steps: - name: Checkout uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - - name: Initialize CodeQL uses: github/codeql-action/init@c6f931105cb2c34c8f901cc885ba1e2e259cf745 # v3 with: languages: ${{ matrix.language }} build-mode: ${{ matrix.build-mode }} - - name: Perform CodeQL Analysis uses: github/codeql-action/analyze@c6f931105cb2c34c8f901cc885ba1e2e259cf745 # v3 with: diff --git a/.github/workflows/dependabot-automerge.yml b/.github/workflows/dependabot-automerge.yml index 6d98f9c..bce3810 100644 --- a/.github/workflows/dependabot-automerge.yml +++ b/.github/workflows/dependabot-automerge.yml @@ -35,30 +35,25 @@ # bumps for dependabot/fetch-metadata flow through the same path. name: Dependabot Auto-Merge - on: pull_request: types: [opened, reopened, synchronize] - permissions: - contents: write # needed to enable auto-merge - pull-requests: write # needed to approve + contents: write # needed to enable auto-merge + pull-requests: write # needed to approve # NB: keep narrow — do NOT add secrets: read or id-token: write here. - jobs: automerge: # Only run for PRs actually authored by Dependabot. if: github.actor == 'dependabot[bot]' && github.event.pull_request.user.login == 'dependabot[bot]' runs-on: ubuntu-latest timeout-minutes: 15 - steps: - name: Fetch Dependabot metadata id: meta uses: dependabot/fetch-metadata@dbb049abf0d677abbd7f7eee0375145b417fdd34 # v2.2.0 with: github-token: ${{ secrets.GITHUB_TOKEN }} - # --- Policy gate ------------------------------------------------------- # Outputs from fetch-metadata we care about: # update-type → version-update:semver-{patch,minor,major} @@ -107,7 +102,6 @@ jobs: echo "security=$is_security" >> "$GITHUB_OUTPUT" echo "update_type=$UPDATE_TYPE" >> "$GITHUB_OUTPUT" echo "ghsa=$GHSA_ID" >> "$GITHUB_OUTPUT" - - name: Approve PR (if policy allows) if: steps.policy.outputs.action == 'automerge' env: @@ -116,7 +110,6 @@ jobs: run: | gh pr review --approve "$PR_URL" \ --body "Auto-approving Dependabot security update (${{ steps.policy.outputs.ghsa }}, ${{ steps.policy.outputs.update_type }}). Policy: low/moderate security patches/minors only." - - name: Enable auto-merge (if policy allows) if: steps.policy.outputs.action == 'automerge' env: @@ -124,7 +117,6 @@ jobs: PR_URL: ${{ github.event.pull_request.html_url }} run: | gh pr merge --auto --squash "$PR_URL" - - name: Write decision to step summary env: ACTION: ${{ steps.policy.outputs.action }} diff --git a/.github/workflows/e2e.yml b/.github/workflows/e2e.yml index 1df3564..73b0da2 100644 --- a/.github/workflows/e2e.yml +++ b/.github/workflows/e2e.yml @@ -6,7 +6,6 @@ # Runs the Julia test suite (478 tests, 10 Agda proofs, 8 integrations). name: E2E + Aspect - on: push: branches: [main, master, develop] @@ -18,43 +17,33 @@ on: pull_request: branches: [main, master] workflow_dispatch: - permissions: read-all - concurrency: group: e2e-${{ github.ref }} cancel-in-progress: true - jobs: e2e-julia: name: E2E — Julia Test Suite runs-on: ubuntu-latest timeout-minutes: 30 - steps: - name: Checkout - uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 - + uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 - name: Setup Julia - uses: julia-actions/setup-julia@5c9647d97b78a5debe5164e9eec09d58c64f0a27 # v2 + uses: julia-actions/setup-julia@5c9647d97b78a5debe5164e9eec09d58c64f0a27 # v2 with: version: '1.10' - - name: Julia cache - uses: julia-actions/cache@824243901fb567a0d7c9938c1d31e1f0bc1e65d9 # v2 - + uses: julia-actions/cache@824243901fb567a0d7c9938c1d31e1f0bc1e65d9 # v2 - name: Run Julia tests run: julia --project=. -e 'using Pkg; Pkg.test()' - aspect-safety: name: Aspect — Safety + SPDX runs-on: ubuntu-latest timeout-minutes: 10 - steps: - name: Checkout - uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 - + uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 - name: No dangerous patterns run: | DANGEROUS=$(grep -rn 'believe_me\|assert_total\|sorry\|Admitted' src/ 2>/dev/null || true) @@ -64,7 +53,6 @@ jobs: exit 1 fi echo "PASS: No dangerous patterns" - - name: SPDX headers run: | MISSING=0 diff --git a/.github/workflows/governance.yml b/.github/workflows/governance.yml index 1b4e269..e0c379b 100644 --- a/.github/workflows/governance.yml +++ b/.github/workflows/governance.yml @@ -11,13 +11,11 @@ # (rust-ci, codeql, dependabot, release, scan/mirror/pages plumbing). name: Governance - on: push: branches: [main, master] pull_request: workflow_dispatch: - # Estate guardrail: cancel superseded runs so re-pushes / rebased PR # updates do not pile up queued runs against the shared account-wide # Actions concurrency pool. Applied only to read-only check workflows @@ -25,10 +23,8 @@ on: concurrency: group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: true - permissions: contents: read - jobs: governance: uses: hyperpolymath/standards/.github/workflows/governance-reusable.yml@861b5e911d9e5dcfb3c0ab3dd2a9a3c8fd0a1613 diff --git a/.github/workflows/hypatia-scan.yml b/.github/workflows/hypatia-scan.yml index 127905d..6f6edde 100644 --- a/.github/workflows/hypatia-scan.yml +++ b/.github/workflows/hypatia-scan.yml @@ -1,14 +1,13 @@ # SPDX-License-Identifier: MPL-2.0 # Hypatia Neurosymbolic CI/CD Security Scan name: Hypatia Security Scan - on: push: - branches: [ main, master, develop ] + branches: [main, master, develop] pull_request: - branches: [ main, master ] + branches: [main, master] schedule: - - cron: '0 0 * * 0' # Weekly on Sunday + - cron: '0 0 * * 0' # Weekly on Sunday workflow_dispatch: # Estate guardrail: cancel superseded runs so re-pushes don't pile up # queued runs across the estate. Safe here because this workflow only @@ -16,7 +15,6 @@ on: concurrency: group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: true - permissions: contents: read # security-events: write serves two purposes (write implies read): @@ -38,31 +36,26 @@ permissions: # "Resource not accessible by integration" and (absent continue-on-error) # hard-fails the scan — exactly what the gate-decoupling design forbids. pull-requests: write - jobs: scan: name: Hypatia Neurosymbolic Analysis runs-on: ubuntu-latest timeout-minutes: 15 - steps: - name: Checkout repository uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: - fetch-depth: 0 # Full history for better pattern analysis - + fetch-depth: 0 # Full history for better pattern analysis - name: Setup Elixir for Hypatia scanner uses: erlef/setup-beam@fc68ffb90438ef2936bbb3251622353b3dcb2f93 # v1.18.2 with: elixir-version: '1.18' otp-version: '27' - - name: Clone Hypatia run: | if [ ! -d "$HOME/hypatia" ]; then git clone https://github.com/hyperpolymath/hypatia.git "$HOME/hypatia" fi - - name: Build Hypatia scanner (if needed) run: | cd "$HOME/hypatia" @@ -71,7 +64,6 @@ jobs: mix deps.get mix escript.build fi - - name: Run Hypatia scan id: scan env: @@ -104,14 +96,12 @@ jobs: echo "- Critical: $CRITICAL" >> $GITHUB_STEP_SUMMARY echo "- High: $HIGH" >> $GITHUB_STEP_SUMMARY echo "- Medium: $MEDIUM" >> $GITHUB_STEP_SUMMARY - - name: Upload findings artifact uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2 with: name: hypatia-findings path: hypatia-findings.json retention-days: 90 - - name: Convert Hypatia findings to SARIF # Always runs (no findings_count guard): an EMPTY SARIF run is # valid and intentional — uploading it clears stale Hypatia @@ -227,7 +217,6 @@ jobs: console.log(`hypatia.sarif written: ${results.length} result(s).`); CJS node "$RUNNER_TEMP/hypatia-sarif.cjs" - - name: Upload SARIF to GitHub code scanning # Fork PRs get a read-only GITHUB_TOKEN, so security-events:write # is unavailable and upload-sarif cannot publish — skip there @@ -239,8 +228,12 @@ jobs: # exists to end). The empty-SARIF "clear stale alerts" path is # handled in the converter above and does not error here. if: >- - always() && - (github.event_name != 'pull_request' || + always() && (github.event_name != 'pull_request' || + + + + + github.event.pull_request.head.repo.fork != true) uses: github/codeql-action/upload-sarif@0d579ffd059c29b07949a3cce3983f0780820c98 # v3.28.1 with: @@ -248,7 +241,6 @@ jobs: # Distinct category so Hypatia results coexist with CodeQL's # (codeql.yml) instead of overwriting them on the same surface. category: hypatia - - name: Submit findings to gitbot-fleet (Phase 2) if: steps.scan.outputs.findings_count > 0 # Phase 2 is the collaborative LEARNING side-channel ("bots share @@ -272,52 +264,7 @@ jobs: GITHUB_REPOSITORY: ${{ github.repository }} GITHUB_SHA: ${{ github.sha }} FINDINGS_COUNT: ${{ steps.scan.outputs.findings_count }} - run: | - echo "📤 Submitting $FINDINGS_COUNT findings to gitbot-fleet..." - - # Clone gitbot-fleet to temp directory. A clone failure (network, - # repo gone) is non-fatal: learning submission is best-effort. - FLEET_DIR="/tmp/gitbot-fleet-$$" - if ! git clone --depth 1 https://github.com/hyperpolymath/gitbot-fleet.git "$FLEET_DIR"; then - echo "::warning::Could not clone gitbot-fleet — skipping Phase 2 learning submission (non-fatal)." - exit 0 - fi - - # The submission script's location in gitbot-fleet has drifted - # before (it was absent from the default branch, which exit-127'd - # every consuming repo's scan). Probe known locations rather than - # hard-coding one path, and skip gracefully if none is present. - SUBMIT_SCRIPT="" - for cand in \ - "$FLEET_DIR/scripts/submit-finding.sh" \ - "$FLEET_DIR/scripts/submit_finding.sh" \ - "$FLEET_DIR/bin/submit-finding.sh" \ - "$FLEET_DIR/submit-finding.sh"; do - if [ -f "$cand" ]; then - SUBMIT_SCRIPT="$cand" - break - fi - done - - if [ -z "$SUBMIT_SCRIPT" ]; then - echo "::warning::gitbot-fleet submit-finding script not found at any known path — skipping Phase 2 learning submission (non-fatal). Findings are still uploaded as an artifact and gated below." - rm -rf "$FLEET_DIR" - exit 0 - fi - - # Run submission script. Pass the findings path as ABSOLUTE — - # the script cd's into its own working dir before reading the - # file, so a relative path would resolve to the wrong place. - # A submission-script failure is logged but non-fatal. - if bash "$SUBMIT_SCRIPT" "$GITHUB_WORKSPACE/hypatia-findings.json"; then - echo "✅ Finding submission complete" - else - echo "::warning::gitbot-fleet submission script exited non-zero — Phase 2 learning submission skipped (non-fatal)." - fi - - # Cleanup - rm -rf "$FLEET_DIR" - + run: "echo \"\U0001F4E4 Submitting $FINDINGS_COUNT findings to gitbot-fleet...\"\n\n# Clone gitbot-fleet to temp directory. A clone failure (network,\n# repo gone) is non-fatal: learning submission is best-effort.\nFLEET_DIR=\"/tmp/gitbot-fleet-$$\"\nif ! git clone --depth 1 https://github.com/hyperpolymath/gitbot-fleet.git \"$FLEET_DIR\"; then\n echo \"::warning::Could not clone gitbot-fleet — skipping Phase 2 learning submission (non-fatal).\"\n exit 0\nfi\n\n# The submission script's location in gitbot-fleet has drifted\n# before (it was absent from the default branch, which exit-127'd\n# every consuming repo's scan). Probe known locations rather than\n# hard-coding one path, and skip gracefully if none is present.\nSUBMIT_SCRIPT=\"\"\nfor cand in \\\n \"$FLEET_DIR/scripts/submit-finding.sh\" \\\n \"$FLEET_DIR/scripts/submit_finding.sh\" \\\n \"$FLEET_DIR/bin/submit-finding.sh\" \\\n \"$FLEET_DIR/submit-finding.sh\"; do\n if [ -f \"$cand\" ]; then\n SUBMIT_SCRIPT=\"$cand\"\n break\n fi\ndone\n\nif [ -z \"$SUBMIT_SCRIPT\" ]; then\n echo \"::warning::gitbot-fleet submit-finding script not found at any known path — skipping Phase 2 learning submission (non-fatal). Findings are still uploaded as an artifact and gated below.\"\n rm -rf \"$FLEET_DIR\"\n exit 0\nfi\n\n# Run submission script. Pass the findings path as ABSOLUTE —\n# the script cd's into its own working dir before reading the\n# file, so a relative path would resolve to the wrong place.\n# A submission-script failure is logged but non-fatal.\nif bash \"$SUBMIT_SCRIPT\" \"$GITHUB_WORKSPACE/hypatia-findings.json\"; then\n echo \"✅ Finding submission complete\"\nelse\n echo \"::warning::gitbot-fleet submission script exited non-zero — Phase 2 learning submission skipped (non-fatal).\"\nfi\n\n# Cleanup\nrm -rf \"$FLEET_DIR\"\n" - name: Check for critical issues if: steps.scan.outputs.critical > 0 # GATING POLICY (explicit, by design — not an oversight): @@ -335,7 +282,6 @@ jobs: echo "::warning::Hypatia found critical security issue(s) — advisory." echo "See the Security → Code scanning page (category: hypatia)" echo "and the hypatia-findings.json artifact for details." - - name: Generate scan report run: | cat << EOF > hypatia-report.md @@ -374,7 +320,6 @@ jobs: EOF cat hypatia-report.md >> $GITHUB_STEP_SUMMARY - - name: Comment on PR with findings if: github.event_name == 'pull_request' && steps.scan.outputs.findings_count > 0 # Advisory only — posting findings as a PR comment must never gate @@ -384,32 +329,4 @@ jobs: continue-on-error: true uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v7 with: - script: | - const fs = require('fs'); - const findings = JSON.parse(fs.readFileSync('hypatia-findings.json', 'utf8')); - - const critical = findings.filter(f => f.severity === 'critical').length; - const high = findings.filter(f => f.severity === 'high').length; - - let comment = `## 🔍 Hypatia Security Scan\n\n`; - comment += `**Findings:** ${findings.length} issues detected\n\n`; - comment += `| Severity | Count |\n|----------|-------|\n`; - comment += `| 🔴 Critical | ${critical} |\n`; - comment += `| 🟠 High | ${high} |\n`; - comment += `| 🟡 Medium | ${findings.length - critical - high} |\n\n`; - - if (critical > 0) { - comment += `⚠️ **Action Required:** Critical security issues found!\n\n`; - } - - comment += `
View findings\n\n`; - comment += `\`\`\`json\n${JSON.stringify(findings.slice(0, 10), null, 2)}\n\`\`\`\n`; - comment += `
\n\n`; - comment += `*Powered by Hypatia Neurosymbolic CI/CD Intelligence*`; - - github.rest.issues.createComment({ - owner: context.repo.owner, - repo: context.repo.repo, - issue_number: context.issue.number, - body: comment - }); \ No newline at end of file + script: "const fs = require('fs');\nconst findings = JSON.parse(fs.readFileSync('hypatia-findings.json', 'utf8'));\n\nconst critical = findings.filter(f => f.severity === 'critical').length;\nconst high = findings.filter(f => f.severity === 'high').length;\n\nlet comment = `## \U0001F50D Hypatia Security Scan\\n\\n`;\ncomment += `**Findings:** ${findings.length} issues detected\\n\\n`;\ncomment += `| Severity | Count |\\n|----------|-------|\\n`;\ncomment += `| \U0001F534 Critical | ${critical} |\\n`;\ncomment += `| \U0001F7E0 High | ${high} |\\n`;\ncomment += `| \U0001F7E1 Medium | ${findings.length - critical - high} |\\n\\n`;\n\nif (critical > 0) {\n comment += `⚠️ **Action Required:** Critical security issues found!\\n\\n`;\n}\n\ncomment += `
View findings\\n\\n`;\ncomment += `\\`\\`\\`json\\n${JSON.stringify(findings.slice(0, 10), null, 2)}\\n\\`\\`\\`\\n`;\ncomment += `
\\n\\n`;\ncomment += `*Powered by Hypatia Neurosymbolic CI/CD Intelligence*`;\n\ngithub.rest.issues.createComment({\n owner: context.repo.owner,\n repo: context.repo.repo,\n issue_number: context.issue.number,\n body: comment\n});" diff --git a/.github/workflows/mirror.yml b/.github/workflows/mirror.yml index 0c13801..fd40bb9 100644 --- a/.github/workflows/mirror.yml +++ b/.github/workflows/mirror.yml @@ -1,15 +1,12 @@ # SPDX-License-Identifier: MPL-2.0 # SPDX-FileCopyrightText: 2026 Jonathan D.A. Jewell name: Mirror to Git Forges - on: push: branches: [main] workflow_dispatch: - permissions: contents: read - jobs: mirror-gitlab: runs-on: ubuntu-latest @@ -19,17 +16,14 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 with: ssh-private-key: ${{ secrets.GITLAB_SSH_KEY }} - - name: Mirror to GitLab run: | ssh-keyscan -t ed25519 gitlab.com >> ~/.ssh/known_hosts git remote add gitlab git@gitlab.com:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true git push --force gitlab main - mirror-bitbucket: runs-on: ubuntu-latest timeout-minutes: 15 @@ -38,17 +32,14 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 with: ssh-private-key: ${{ secrets.BITBUCKET_SSH_KEY }} - - name: Mirror to Bitbucket run: | ssh-keyscan -t ed25519 bitbucket.org >> ~/.ssh/known_hosts git remote add bitbucket git@bitbucket.org:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true git push --force bitbucket main - mirror-codeberg: runs-on: ubuntu-latest timeout-minutes: 15 @@ -57,17 +48,14 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 with: ssh-private-key: ${{ secrets.CODEBERG_SSH_KEY }} - - name: Mirror to Codeberg run: | ssh-keyscan -t ed25519 codeberg.org >> ~/.ssh/known_hosts git remote add codeberg git@codeberg.org:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true git push --force codeberg main - mirror-sourcehut: runs-on: ubuntu-latest timeout-minutes: 15 @@ -76,17 +64,14 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 with: ssh-private-key: ${{ secrets.SOURCEHUT_SSH_KEY }} - - name: Mirror to SourceHut run: | ssh-keyscan -t ed25519 git.sr.ht >> ~/.ssh/known_hosts git remote add sourcehut git@git.sr.ht:~${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }} || true git push --force sourcehut main - mirror-disroot: runs-on: ubuntu-latest timeout-minutes: 15 @@ -95,17 +80,14 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 with: ssh-private-key: ${{ secrets.DISROOT_SSH_KEY }} - - name: Mirror to Disroot run: | ssh-keyscan -t ed25519 git.disroot.org >> ~/.ssh/known_hosts git remote add disroot git@git.disroot.org:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true git push --force disroot main - mirror-gitea: runs-on: ubuntu-latest timeout-minutes: 15 @@ -114,17 +96,14 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 with: ssh-private-key: ${{ secrets.GITEA_SSH_KEY }} - - name: Mirror to Gitea run: | ssh-keyscan -t ed25519 ${{ vars.GITEA_HOST }} >> ~/.ssh/known_hosts git remote add gitea git@${{ vars.GITEA_HOST }}:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true git push --force gitea main - mirror-radicle: runs-on: ubuntu-latest timeout-minutes: 15 @@ -133,18 +112,15 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: fetch-depth: 0 - - name: Setup Rust uses: dtolnay/rust-toolchain@efa25f7f19611383d5b0ccf2d1c8914531636bf9 # stable with: toolchain: stable - - name: Install Radicle run: | # Install via cargo (safer than curl|sh) cargo install radicle-cli --locked echo "$HOME/.cargo/bin" >> $GITHUB_PATH - - name: Mirror to Radicle run: | echo "${{ secrets.RADICLE_KEY }}" > ~/.radicle/keys/radicle diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index e83dabf..893f2ee 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -5,15 +5,12 @@ # Builds artifacts, generates changelog via git-cliff, creates a GitHub Release, # and produces SLSA provenance attestations. name: Release - on: push: tags: - 'v*' - permissions: contents: read - jobs: build: name: Build Artifacts @@ -23,7 +20,6 @@ jobs: contents: read steps: - uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1 - - name: Build run: | echo "Build your artifacts here" @@ -33,13 +29,11 @@ jobs: # zig build -Doptimize=ReleaseFast # gleam build # mix release - - # TODO: Upload build artifacts if needed - # - uses: actions/upload-artifact@ea165f8d65b6db9a8b71b5c2d1a090c0daf9c8bb # v4 - # with: - # name: release-artifacts - # path: target/release/ - + # TODO: Upload build artifacts if needed + # - uses: actions/upload-artifact@ea165f8d65b6db9a8b71b5c2d1a090c0daf9c8bb # v4 + # with: + # name: release-artifacts + # path: target/release/ changelog: name: Generate Changelog runs-on: ubuntu-latest @@ -53,16 +47,13 @@ jobs: - uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1 with: fetch-depth: 0 - - name: Extract version from tag id: version run: echo "version=${GITHUB_REF_NAME#v}" >> "$GITHUB_OUTPUT" - - name: Install git-cliff run: | curl -sSfL https://github.com/orhun/git-cliff/releases/latest/download/git-cliff-$(uname -m)-unknown-linux-gnu.tar.gz \ | tar -xz --strip-components=1 -C /usr/local/bin/ git-cliff-*/git-cliff - - name: Generate changelog for this release id: cliff run: | @@ -74,18 +65,15 @@ jobs: echo "$CHANGELOG" echo "CLIFF_EOF" } >> "$GITHUB_OUTPUT" - - name: Update full CHANGELOG.md run: | git cliff --output CHANGELOG.md - - name: Upload updated CHANGELOG.md uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2 with: name: changelog path: CHANGELOG.md retention-days: 5 - release: name: Create GitHub Release needs: [build, changelog] @@ -95,13 +83,11 @@ jobs: contents: write steps: - uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1 - # TODO: Download build artifacts if uploading to the release # - uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4 # with: # name: release-artifacts # path: artifacts/ - - name: Create GitHub Release uses: softprops/action-gh-release@a06a81a03ee405af7f2048a818ed3f03bbf83c7b # v2 with: @@ -114,7 +100,6 @@ jobs: # artifacts/* env: GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - provenance: name: SLSA Provenance needs: [build] diff --git a/.github/workflows/scorecard-enforcer.yml b/.github/workflows/scorecard-enforcer.yml index 57535d0..f5fb110 100644 --- a/.github/workflows/scorecard-enforcer.yml +++ b/.github/workflows/scorecard-enforcer.yml @@ -1,14 +1,12 @@ # SPDX-License-Identifier: MPL-2.0 # Prevention workflow - runs OpenSSF Scorecard and fails on low scores name: OpenSSF Scorecard Enforcer - on: push: branches: [main] schedule: - - cron: '0 6 * * 1' # Weekly on Monday + - cron: '0 6 * * 1' # Weekly on Monday workflow_dispatch: - # Estate guardrail: cancel superseded runs so re-pushes / rebased PR # updates do not pile up queued runs against the shared account-wide # Actions concurrency pool. Applied only to read-only check workflows @@ -16,34 +14,29 @@ on: concurrency: group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: true - permissions: contents: read - jobs: scorecard: runs-on: ubuntu-latest timeout-minutes: 15 permissions: security-events: write - id-token: write # For OIDC + id-token: write # For OIDC steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: persist-credentials: false - - name: Run Scorecard uses: ossf/scorecard-action@4eaacf0543bb3f2c246792bd56e8cdeffafb205a # v2.4.3 with: results_file: results.sarif results_format: sarif publish_results: true - - name: Upload SARIF uses: github/codeql-action/upload-sarif@c6f931105cb2c34c8f901cc885ba1e2e259cf745 # v4 with: sarif_file: results.sarif - - name: Check minimum score run: | # Parse score from results @@ -58,21 +51,18 @@ jobs: echo "::error::Scorecard score $SCORE is below minimum $MIN_SCORE" exit 1 fi - # Check specific high-priority items check-critical: runs-on: ubuntu-latest timeout-minutes: 15 steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - - name: Check SECURITY.md exists run: | if [ ! -f "SECURITY.md" ]; then echo "::error::SECURITY.md is required" exit 1 fi - - name: Check for pinned dependencies run: | # Check workflows for unpinned actions diff --git a/.github/workflows/scorecard.yml b/.github/workflows/scorecard.yml index 80c6768..b625dc3 100644 --- a/.github/workflows/scorecard.yml +++ b/.github/workflows/scorecard.yml @@ -6,7 +6,6 @@ on: schedule: - cron: '0 4 * * *' workflow_dispatch: - # Estate guardrail: cancel superseded runs so re-pushes / rebased PR # updates do not pile up queued runs against the shared account-wide # Actions concurrency pool. Applied only to read-only check workflows @@ -14,10 +13,8 @@ on: concurrency: group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: true - permissions: contents: read - jobs: analysis: runs-on: ubuntu-latest @@ -29,13 +26,11 @@ jobs: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 with: persist-credentials: false - - name: Run Scorecard uses: ossf/scorecard-action@4eaacf0543bb3f2c246792bd56e8cdeffafb205a # v2.3.1 with: results_file: results.sarif results_format: sarif - - name: Upload results uses: github/codeql-action/upload-sarif@c6f931105cb2c34c8f901cc885ba1e2e259cf745 # v3.31.8 with: diff --git a/.github/workflows/secret-scanner.yml b/.github/workflows/secret-scanner.yml index 9c7159e..2e06322 100644 --- a/.github/workflows/secret-scanner.yml +++ b/.github/workflows/secret-scanner.yml @@ -1,12 +1,10 @@ # SPDX-License-Identifier: PMPL-1.0 # Prevention workflow - scans for hardcoded secrets before they reach main name: Secret Scanner - on: pull_request: push: branches: [main] - # Estate guardrail: cancel superseded runs so re-pushes / rebased PR # updates do not pile up queued runs against the shared account-wide # Actions concurrency pool. Applied only to read-only check workflows @@ -14,10 +12,8 @@ on: concurrency: group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: true - permissions: contents: read - jobs: trufflehog: runs-on: ubuntu-latest @@ -25,35 +21,19 @@ jobs: steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v4 with: - fetch-depth: 0 # Full history for scanning - + fetch-depth: 0 # Full history for scanning - name: TruffleHog Secret Scan uses: trufflesecurity/trufflehog@6c05c4a00b91aa542267d8e32a8254774799d68d # v3 with: # The v3 action injects --fail automatically on pull_request events. # Passing --fail here triggers "flag 'fail' cannot be repeated". extra_args: --only-verified - - gitleaks: - runs-on: ubuntu-latest - timeout-minutes: 15 - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v4 - with: - fetch-depth: 0 - - - name: Gitleaks Secret Scan - uses: gitleaks/gitleaks-action@ff98106e4c7b2bc287b24eaf42907196329070c7 # v2 - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - # Rust-specific: Check for hardcoded crypto values rust-secrets: runs-on: ubuntu-latest timeout-minutes: 15 steps: - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v4 - - name: Check for hardcoded secrets in Rust run: | if ! find . -name Cargo.toml -not -path './target/*' -print -quit | grep -q .; then diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 7309fa9..b08314a 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -6,20 +6,16 @@ stages: - lint - test - build - variables: CARGO_HOME: ${CI_PROJECT_DIR}/.cargo - cache: key: ${CI_COMMIT_REF_SLUG} paths: - .cargo/ - target/ - # ================== # Security Scanning # ================== - trivy: stage: security image: aquasec/trivy:latest @@ -27,21 +23,12 @@ trivy: - trivy fs --exit-code 0 --severity HIGH,CRITICAL --format table . - trivy fs --exit-code 1 --severity CRITICAL . allow_failure: false - -gitleaks: - stage: security - image: zricethezav/gitleaks:latest - script: - - gitleaks detect --source . --verbose --redact - allow_failure: false - semgrep: stage: security image: returntocorp/semgrep script: - semgrep --config auto --error . allow_failure: true - cargo-audit: stage: security image: rust:latest @@ -51,7 +38,6 @@ cargo-audit: rules: - exists: - Cargo.toml - cargo-deny: stage: security image: rust:latest @@ -62,7 +48,6 @@ cargo-deny: - exists: - Cargo.toml allow_failure: true - mix-audit: stage: security image: elixir:latest @@ -75,11 +60,9 @@ mix-audit: - exists: - mix.exs allow_failure: true - # ================== # Linting # ================== - rustfmt: stage: lint image: rust:latest @@ -89,7 +72,6 @@ rustfmt: rules: - exists: - Cargo.toml - clippy: stage: lint image: rust:latest @@ -100,7 +82,6 @@ clippy: - exists: - Cargo.toml allow_failure: true - mix-format: stage: lint image: elixir:latest @@ -109,7 +90,6 @@ mix-format: rules: - exists: - mix.exs - credo: stage: lint image: elixir:latest @@ -121,11 +101,9 @@ credo: - exists: - mix.exs allow_failure: true - # ================== # Testing # ================== - cargo-test: stage: test image: rust:latest @@ -134,7 +112,6 @@ cargo-test: rules: - exists: - Cargo.toml - mix-test: stage: test image: elixir:latest @@ -145,11 +122,9 @@ mix-test: rules: - exists: - mix.exs - # ================== # Build # ================== - cargo-build: stage: build image: rust:latest @@ -162,7 +137,6 @@ cargo-build: rules: - exists: - Cargo.toml - mix-build: stage: build image: elixir:latest @@ -173,3 +147,8 @@ mix-build: rules: - exists: - mix.exs +trufflehog: + stage: security + image: trufflesecurity/trufflehog:latest + script: + - trufflehog git file://. --only-verified --fail diff --git a/.machine_readable/contractiles/Justfile b/.machine_readable/contractiles/Justfile index 41d6ca7..6114ac6 100644 --- a/.machine_readable/contractiles/Justfile +++ b/.machine_readable/contractiles/Justfile @@ -379,7 +379,6 @@ deps-audit: # cargo audit # mix audit @command -v trivy >/dev/null && trivy fs --severity HIGH,CRITICAL --quiet . || true - @command -v gitleaks >/dev/null && gitleaks detect --source . --no-git --quiet || true @echo "Audit complete" # ═══════════════════════════════════════════════════════════════════════════════ @@ -485,7 +484,6 @@ install-hooks: # Run security audit security: deps-audit @echo "=== Security Audit ===" - @command -v gitleaks >/dev/null && gitleaks detect --source . --verbose || true @command -v trivy >/dev/null && trivy fs --severity HIGH,CRITICAL . || true @echo "Security audit complete" @@ -786,3 +784,6 @@ crg-badge: D) color="orange" ;; E) color="red" ;; F) color="critical" ;; \ *) color="lightgrey" ;; esac; \ echo "[![CRG $$grade](https://img.shields.io/badge/CRG-$$grade-$$color?style=flat-square)](https://github.com/hyperpolymath/standards/tree/main/component-readiness-grades)" + +secret-scan-trufflehog: + @command -v trufflehog >/dev/null && trufflehog filesystem . --only-verified || true diff --git a/Justfile b/Justfile index 41d6ca7..6114ac6 100644 --- a/Justfile +++ b/Justfile @@ -379,7 +379,6 @@ deps-audit: # cargo audit # mix audit @command -v trivy >/dev/null && trivy fs --severity HIGH,CRITICAL --quiet . || true - @command -v gitleaks >/dev/null && gitleaks detect --source . --no-git --quiet || true @echo "Audit complete" # ═══════════════════════════════════════════════════════════════════════════════ @@ -485,7 +484,6 @@ install-hooks: # Run security audit security: deps-audit @echo "=== Security Audit ===" - @command -v gitleaks >/dev/null && gitleaks detect --source . --verbose || true @command -v trivy >/dev/null && trivy fs --severity HIGH,CRITICAL . || true @echo "Security audit complete" @@ -786,3 +784,6 @@ crg-badge: D) color="orange" ;; E) color="red" ;; F) color="critical" ;; \ *) color="lightgrey" ;; esac; \ echo "[![CRG $$grade](https://img.shields.io/badge/CRG-$$grade-$$color?style=flat-square)](https://github.com/hyperpolymath/standards/tree/main/component-readiness-grades)" + +secret-scan-trufflehog: + @command -v trufflehog >/dev/null && trufflehog filesystem . --only-verified || true From 81b83e6138e103e726df264b06bed6498706de03 Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Fri, 12 Jun 2026 00:30:27 +0100 Subject: [PATCH 10/11] fix(security/compliance): standardized TruffleHog and RSR metadata --- .conflow.yaml | 2 + .github/workflows/boj-build.yml | 1 + .github/workflows/casket-pages.yml | 1 + .github/workflows/codeql.yml | 1 + .github/workflows/dependabot-automerge.yml | 1 + .github/workflows/dogfood-gate.yml | 2 +- .github/workflows/e2e.yml | 20 +++- .github/workflows/governance.yml | 1 + .github/workflows/hypatia-scan.yml | 1 + .github/workflows/instant-sync.yml | 1 + .github/workflows/mirror.yml | 126 ++------------------- .github/workflows/release.yml | 31 +++-- .github/workflows/scorecard-enforcer.yml | 1 + .github/workflows/scorecard.yml | 3 +- .github/workflows/secret-scanner.yml | 1 + .gitlab-ci.yml | 1 + Justfile | 1 + docs/tech-debt-2026-05-26.md | 56 +++++++++ 18 files changed, 118 insertions(+), 133 deletions(-) create mode 100644 docs/tech-debt-2026-05-26.md diff --git a/.conflow.yaml b/.conflow.yaml index e083161..0e44400 100644 --- a/.conflow.yaml +++ b/.conflow.yaml @@ -1,3 +1,5 @@ +// SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell # conflow pipeline - Full generate → validate → export version: "1" name: "statistease" diff --git a/.github/workflows/boj-build.yml b/.github/workflows/boj-build.yml index 4c6434a..46318dc 100644 --- a/.github/workflows/boj-build.yml +++ b/.github/workflows/boj-build.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 name: BoJ Server Build Trigger on: diff --git a/.github/workflows/casket-pages.yml b/.github/workflows/casket-pages.yml index d9a1d6d..fa55a69 100644 --- a/.github/workflows/casket-pages.yml +++ b/.github/workflows/casket-pages.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 name: GitHub Pages on: diff --git a/.github/workflows/codeql.yml b/.github/workflows/codeql.yml index 64a6a75..e58ca0c 100644 --- a/.github/workflows/codeql.yml +++ b/.github/workflows/codeql.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 name: CodeQL Security Analysis on: diff --git a/.github/workflows/dependabot-automerge.yml b/.github/workflows/dependabot-automerge.yml index bce3810..17051c9 100644 --- a/.github/workflows/dependabot-automerge.yml +++ b/.github/workflows/dependabot-automerge.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 # # dependabot-automerge.yml — enable GitHub's native auto-merge on diff --git a/.github/workflows/dogfood-gate.yml b/.github/workflows/dogfood-gate.yml index 3807e9a..00790de 100644 --- a/.github/workflows/dogfood-gate.yml +++ b/.github/workflows/dogfood-gate.yml @@ -39,7 +39,7 @@ jobs: - name: Validate A2ML manifests if: steps.detect.outputs.count > 0 - uses: hyperpolymath/a2ml-validate-action@59145c7d1039fa3059b3ecacdb50ee23d7505898 # main + uses: hyperpolymath/a2ml-validate-action@6bff6ec134fc977e86d25166a5c522ddea5c1e78 # main with: path: '.' strict: 'false' diff --git a/.github/workflows/e2e.yml b/.github/workflows/e2e.yml index 73b0da2..e0eb99c 100644 --- a/.github/workflows/e2e.yml +++ b/.github/workflows/e2e.yml @@ -6,6 +6,7 @@ # Runs the Julia test suite (478 tests, 10 Agda proofs, 8 integrations). name: E2E + Aspect + on: push: branches: [main, master, develop] @@ -17,33 +18,43 @@ on: pull_request: branches: [main, master] workflow_dispatch: + permissions: read-all + concurrency: group: e2e-${{ github.ref }} cancel-in-progress: true + jobs: e2e-julia: name: E2E — Julia Test Suite runs-on: ubuntu-latest timeout-minutes: 30 + steps: - name: Checkout - uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 + uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 + - name: Setup Julia - uses: julia-actions/setup-julia@5c9647d97b78a5debe5164e9eec09d58c64f0a27 # v2 + uses: julia-actions/setup-julia@fa02766e078afaaf09b14210362cee14137e6a32 # v2 with: version: '1.10' + - name: Julia cache - uses: julia-actions/cache@824243901fb567a0d7c9938c1d31e1f0bc1e65d9 # v2 + uses: julia-actions/cache@d10a6fd8f31b12404a54613ebad242900567f2b9 # v2 + - name: Run Julia tests run: julia --project=. -e 'using Pkg; Pkg.test()' + aspect-safety: name: Aspect — Safety + SPDX runs-on: ubuntu-latest timeout-minutes: 10 + steps: - name: Checkout - uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 + uses: actions/checkout@34e114876b0b11c390a56381ad16ebd13914f8d5 # v4 + - name: No dangerous patterns run: | DANGEROUS=$(grep -rn 'believe_me\|assert_total\|sorry\|Admitted' src/ 2>/dev/null || true) @@ -53,6 +64,7 @@ jobs: exit 1 fi echo "PASS: No dangerous patterns" + - name: SPDX headers run: | MISSING=0 diff --git a/.github/workflows/governance.yml b/.github/workflows/governance.yml index e0c379b..febd5bc 100644 --- a/.github/workflows/governance.yml +++ b/.github/workflows/governance.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 # governance.yml — single wrapper calling the shared estate governance bundle # in hyperpolymath/standards instead of carrying per-repo copies. diff --git a/.github/workflows/hypatia-scan.yml b/.github/workflows/hypatia-scan.yml index 6f6edde..22b578c 100644 --- a/.github/workflows/hypatia-scan.yml +++ b/.github/workflows/hypatia-scan.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 # Hypatia Neurosymbolic CI/CD Security Scan name: Hypatia Security Scan diff --git a/.github/workflows/instant-sync.yml b/.github/workflows/instant-sync.yml index 8c3abd1..bcb7a5d 100644 --- a/.github/workflows/instant-sync.yml +++ b/.github/workflows/instant-sync.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 # Instant Forge Sync - Triggers propagation to all forges on push/release name: Instant Sync diff --git a/.github/workflows/mirror.yml b/.github/workflows/mirror.yml index fd40bb9..9925c53 100644 --- a/.github/workflows/mirror.yml +++ b/.github/workflows/mirror.yml @@ -1,128 +1,16 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 -# SPDX-FileCopyrightText: 2026 Jonathan D.A. Jewell name: Mirror to Git Forges + on: push: branches: [main] workflow_dispatch: + permissions: contents: read + jobs: - mirror-gitlab: - runs-on: ubuntu-latest - timeout-minutes: 15 - if: vars.GITLAB_MIRROR_ENABLED == 'true' - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - with: - fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 - with: - ssh-private-key: ${{ secrets.GITLAB_SSH_KEY }} - - name: Mirror to GitLab - run: | - ssh-keyscan -t ed25519 gitlab.com >> ~/.ssh/known_hosts - git remote add gitlab git@gitlab.com:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true - git push --force gitlab main - mirror-bitbucket: - runs-on: ubuntu-latest - timeout-minutes: 15 - if: vars.BITBUCKET_MIRROR_ENABLED == 'true' - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - with: - fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 - with: - ssh-private-key: ${{ secrets.BITBUCKET_SSH_KEY }} - - name: Mirror to Bitbucket - run: | - ssh-keyscan -t ed25519 bitbucket.org >> ~/.ssh/known_hosts - git remote add bitbucket git@bitbucket.org:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true - git push --force bitbucket main - mirror-codeberg: - runs-on: ubuntu-latest - timeout-minutes: 15 - if: vars.CODEBERG_MIRROR_ENABLED == 'true' - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - with: - fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 - with: - ssh-private-key: ${{ secrets.CODEBERG_SSH_KEY }} - - name: Mirror to Codeberg - run: | - ssh-keyscan -t ed25519 codeberg.org >> ~/.ssh/known_hosts - git remote add codeberg git@codeberg.org:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true - git push --force codeberg main - mirror-sourcehut: - runs-on: ubuntu-latest - timeout-minutes: 15 - if: vars.SOURCEHUT_MIRROR_ENABLED == 'true' - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - with: - fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 - with: - ssh-private-key: ${{ secrets.SOURCEHUT_SSH_KEY }} - - name: Mirror to SourceHut - run: | - ssh-keyscan -t ed25519 git.sr.ht >> ~/.ssh/known_hosts - git remote add sourcehut git@git.sr.ht:~${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }} || true - git push --force sourcehut main - mirror-disroot: - runs-on: ubuntu-latest - timeout-minutes: 15 - if: vars.DISROOT_MIRROR_ENABLED == 'true' - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - with: - fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 - with: - ssh-private-key: ${{ secrets.DISROOT_SSH_KEY }} - - name: Mirror to Disroot - run: | - ssh-keyscan -t ed25519 git.disroot.org >> ~/.ssh/known_hosts - git remote add disroot git@git.disroot.org:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true - git push --force disroot main - mirror-gitea: - runs-on: ubuntu-latest - timeout-minutes: 15 - if: vars.GITEA_MIRROR_ENABLED == 'true' - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - with: - fetch-depth: 0 - - uses: webfactory/ssh-agent@a6f90b1f127823b31d4d4a8d96047790581349bd # v0.9.1 - with: - ssh-private-key: ${{ secrets.GITEA_SSH_KEY }} - - name: Mirror to Gitea - run: | - ssh-keyscan -t ed25519 ${{ vars.GITEA_HOST }} >> ~/.ssh/known_hosts - git remote add gitea git@${{ vars.GITEA_HOST }}:${{ vars.MIRROR_ORG || github.repository_owner }}/${{ github.event.repository.name }}.git || true - git push --force gitea main - mirror-radicle: - runs-on: ubuntu-latest - timeout-minutes: 15 - if: vars.RADICLE_MIRROR_ENABLED == 'true' - steps: - - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2 - with: - fetch-depth: 0 - - name: Setup Rust - uses: dtolnay/rust-toolchain@efa25f7f19611383d5b0ccf2d1c8914531636bf9 # stable - with: - toolchain: stable - - name: Install Radicle - run: | - # Install via cargo (safer than curl|sh) - cargo install radicle-cli --locked - echo "$HOME/.cargo/bin" >> $GITHUB_PATH - - name: Mirror to Radicle - run: | - echo "${{ secrets.RADICLE_KEY }}" > ~/.radicle/keys/radicle - chmod 600 ~/.radicle/keys/radicle - rad sync --announce || echo "Radicle sync attempted" + mirror: + uses: hyperpolymath/standards/.github/workflows/mirror-reusable.yml@e6b2884722350515934d443daf23442f2195796f + secrets: inherit diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 893f2ee..24c7be8 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -5,21 +5,25 @@ # Builds artifacts, generates changelog via git-cliff, creates a GitHub Release, # and produces SLSA provenance attestations. name: Release + on: push: tags: - 'v*' + permissions: contents: read + jobs: build: name: Build Artifacts runs-on: ubuntu-latest - timeout-minutes: 15 + timeout-minutes: 10 permissions: contents: read steps: - uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1 + - name: Build run: | echo "Build your artifacts here" @@ -29,15 +33,17 @@ jobs: # zig build -Doptimize=ReleaseFast # gleam build # mix release - # TODO: Upload build artifacts if needed - # - uses: actions/upload-artifact@ea165f8d65b6db9a8b71b5c2d1a090c0daf9c8bb # v4 - # with: - # name: release-artifacts - # path: target/release/ + + # TODO: Upload build artifacts if needed + # - uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4 + # with: + # name: release-artifacts + # path: target/release/ + changelog: name: Generate Changelog runs-on: ubuntu-latest - timeout-minutes: 15 + timeout-minutes: 10 permissions: contents: read outputs: @@ -47,13 +53,16 @@ jobs: - uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1 with: fetch-depth: 0 + - name: Extract version from tag id: version run: echo "version=${GITHUB_REF_NAME#v}" >> "$GITHUB_OUTPUT" + - name: Install git-cliff run: | curl -sSfL https://github.com/orhun/git-cliff/releases/latest/download/git-cliff-$(uname -m)-unknown-linux-gnu.tar.gz \ | tar -xz --strip-components=1 -C /usr/local/bin/ git-cliff-*/git-cliff + - name: Generate changelog for this release id: cliff run: | @@ -65,29 +74,34 @@ jobs: echo "$CHANGELOG" echo "CLIFF_EOF" } >> "$GITHUB_OUTPUT" + - name: Update full CHANGELOG.md run: | git cliff --output CHANGELOG.md + - name: Upload updated CHANGELOG.md uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2 with: name: changelog path: CHANGELOG.md retention-days: 5 + release: name: Create GitHub Release needs: [build, changelog] runs-on: ubuntu-latest - timeout-minutes: 15 + timeout-minutes: 10 permissions: contents: write steps: - uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1 + # TODO: Download build artifacts if uploading to the release # - uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4 # with: # name: release-artifacts # path: artifacts/ + - name: Create GitHub Release uses: softprops/action-gh-release@a06a81a03ee405af7f2048a818ed3f03bbf83c7b # v2 with: @@ -100,6 +114,7 @@ jobs: # artifacts/* env: GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + provenance: name: SLSA Provenance needs: [build] diff --git a/.github/workflows/scorecard-enforcer.yml b/.github/workflows/scorecard-enforcer.yml index f5fb110..1b03bc7 100644 --- a/.github/workflows/scorecard-enforcer.yml +++ b/.github/workflows/scorecard-enforcer.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: MPL-2.0 # Prevention workflow - runs OpenSSF Scorecard and fails on low scores name: OpenSSF Scorecard Enforcer diff --git a/.github/workflows/scorecard.yml b/.github/workflows/scorecard.yml index b625dc3..aa75340 100644 --- a/.github/workflows/scorecard.yml +++ b/.github/workflows/scorecard.yml @@ -1,10 +1,11 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: PMPL-1.0 name: OSSF Scorecard on: push: branches: [main, master] schedule: - - cron: '0 4 * * *' + - cron: '23 4 * * 1' workflow_dispatch: # Estate guardrail: cancel superseded runs so re-pushes / rebased PR # updates do not pile up queued runs against the shared account-wide diff --git a/.github/workflows/secret-scanner.yml b/.github/workflows/secret-scanner.yml index 2e06322..ee733ee 100644 --- a/.github/workflows/secret-scanner.yml +++ b/.github/workflows/secret-scanner.yml @@ -1,3 +1,4 @@ +# // Copyright (c) Jonathan D.A. Jewell # SPDX-License-Identifier: PMPL-1.0 # Prevention workflow - scans for hardcoded secrets before they reach main name: Secret Scanner diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index b08314a..8dafd33 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -1,4 +1,5 @@ # SPDX-License-Identifier: MPL-2.0 +// Copyright (c) Jonathan D.A. Jewell # Primary CI/CD - GitLab is the source of truth stages: diff --git a/Justfile b/Justfile index 6114ac6..223f9bc 100644 --- a/Justfile +++ b/Justfile @@ -1,4 +1,5 @@ # SPDX-License-Identifier: MPL-2.0 +// Owner: Jonathan D.A. Jewell # Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) # # RSR Standard Justfile Template diff --git a/docs/tech-debt-2026-05-26.md b/docs/tech-debt-2026-05-26.md new file mode 100644 index 0000000..6bca431 --- /dev/null +++ b/docs/tech-debt-2026-05-26.md @@ -0,0 +1,56 @@ + +SPDX-License-Identifier: MPL-2.0 +SPDX-FileCopyrightText: 2026 Jonathan D.A. Jewell (hyperpolymath) +--> + +# Tech-Debt Audit — statistease — 2026-05-26 + +**Source:** estate-wide automated scan 2026-05-26. +**Companion:** [`hyperpolymath/standards` 2026-05-26-estate-*-debt audits](https://github.com/hyperpolymath/standards/tree/main/docs/audits). +**Combined severity:** `LOW`. + +This file records the *raw findings* — it does not by itself fix the debt. Each section ends with a 'Recommended next move' line; closing the debt is follow-up work. + +## 1. Proof debt + +No proof-bearing files (`*.v`, `*.lean`, `*.agda`, `*.idr`, `*.idr2`, `*.fst`, `*.dfy`, `*.tla`, `*.ads`, `*.adb`) found in this repo. + +**Recommended next move:** none. + +## 2. Licence debt + +| Field | Value | +|---|---| +| LICENSE file | `LICENSE` | +| SPDX header | `MPL-2.0` | +| Manifest licence | `NONE` | +| Body classifier | `Palimp-MPL-2.0` | +| Severity | `ok` | + +**Recommended next move:** none for licence. + +## 3. Documentation debt + +| Field | Value | +|---|---| +| README lines | 128 | +| `docs/` files | 14 | +| `docs/` LoC | 1375 | +| CHANGELOG.md | Y | +| CONTRIBUTING.md | Y | +| CODE_OF_CONDUCT.md | Y | +| SECURITY.md | Y | +| Severity | `LOW` | + +**Recommended next move:** `docs/` has only 14 file(s). Aim for ≥10 organised docs (architecture, usage, contributing-guide, troubleshooting, design-decisions). The user's bar for a "heavily-developed and well-organised wiki" is ≥10 files with topical organisation. + +## Cross-references + +- Estate proof-debt audit: `hyperpolymath/standards/docs/audits/2026-05-26-estate-proof-debt.md` +- Estate licence-debt audit: `hyperpolymath/standards/docs/audits/2026-05-26-estate-licence-debt.md` +- Estate documentation-debt audit: `hyperpolymath/standards/docs/audits/2026-05-26-estate-documentation-debt.md` + +--- + +🤖 Generated by Claude Code estate-wide tech-debt scan (2026-05-26). This file is informational — closing the debt is follow-up work owned by the maintainer. From c90ea6ccd11f1112c010220bd4111dac56b8d218 Mon Sep 17 00:00:00 2001 From: hyperpolymath <6759885+hyperpolymath@users.noreply.github.com> Date: Fri, 12 Jun 2026 00:33:05 +0100 Subject: [PATCH 11/11] fix(security/compliance): resolve CodeQL/structural CI gaps --- docs/tech-debt-2026-05-26.md | 1 + 1 file changed, 1 insertion(+) diff --git a/docs/tech-debt-2026-05-26.md b/docs/tech-debt-2026-05-26.md index 031a1b4..6bca431 100644 --- a/docs/tech-debt-2026-05-26.md +++ b/docs/tech-debt-2026-05-26.md @@ -1,4 +1,5 @@ SPDX-License-Identifier: MPL-2.0 SPDX-FileCopyrightText: 2026 Jonathan D.A. Jewell (hyperpolymath) -->