From f957fd7b3a1da04ffded469a5940001ca8b45c58 Mon Sep 17 00:00:00 2001
From: Boris Shor <bshor@users.noreply.github.com>
Date: Mon, 8 Jun 2026 12:25:18 -0500
Subject: [PATCH 1/3] r-dicekriging: init pkg

---
 BioArchLinux/r-dicekriging/PKGBUILD   | 33 +++++++++++++++++++++++++++
 BioArchLinux/r-dicekriging/lilac.py   | 13 +++++++++++
 BioArchLinux/r-dicekriging/lilac.yaml | 10 ++++++++
 3 files changed, 56 insertions(+)
 create mode 100644 BioArchLinux/r-dicekriging/PKGBUILD
 create mode 100644 BioArchLinux/r-dicekriging/lilac.py
 create mode 100644 BioArchLinux/r-dicekriging/lilac.yaml

diff --git a/BioArchLinux/r-dicekriging/PKGBUILD b/BioArchLinux/r-dicekriging/PKGBUILD
new file mode 100644
index 0000000000..96a7424cbf
--- /dev/null
+++ b/BioArchLinux/r-dicekriging/PKGBUILD
@@ -0,0 +1,33 @@
+# Maintainer: Boris Shor <boris@bshor.com>
+
+_pkgname=DiceKriging
+_pkgver=1.6.1
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Kriging Methods for Computer Experiments"
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL-2.0-only' 'GPL-3.0-only')
+depends=(
+  r
+)
+optdepends=(
+  r-doparallel
+  r-foreach
+  r-numderiv
+  r-rgenoud
+  r-testthat
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('43540ac986833443d68dba488598eafe')
+b2sums=('a608d27d445e857a881813628018e28a506786376d71eda586caee5c01295faf09c97f0ad8092bc7c43407b02219abe172bb2b5ae4349060ea49efcdc6980f1d')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
diff --git a/BioArchLinux/r-dicekriging/lilac.py b/BioArchLinux/r-dicekriging/lilac.py
new file mode 100644
index 0000000000..9244fd6914
--- /dev/null
+++ b/BioArchLinux/r-dicekriging/lilac.py
@@ -0,0 +1,13 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+import os
+import sys
+sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
+from lilac_r_utils import r_pre_build
+
+def pre_build():
+    r_pre_build(_G)
+
+def post_build():
+    git_pkgbuild_commit()
diff --git a/BioArchLinux/r-dicekriging/lilac.yaml b/BioArchLinux/r-dicekriging/lilac.yaml
new file mode 100644
index 0000000000..9bb200f77b
--- /dev/null
+++ b/BioArchLinux/r-dicekriging/lilac.yaml
@@ -0,0 +1,10 @@
+build_prefix: extra-x86_64
+maintainers:
+  - github: bshor
+    email: boris@bshor.com
+update_on:
+  - source: rpkgs
+    pkgname: DiceKriging
+    repo: cran
+    md5: true
+  - alias: r

From 8c20f8f289c58e77b7e4d5addd13cc10d50372ed Mon Sep 17 00:00:00 2001
From: Boris Shor <bshor@users.noreply.github.com>
Date: Mon, 8 Jun 2026 12:25:18 -0500
Subject: [PATCH 2/3] r-grf: init pkg

---
 BioArchLinux/r-grf/PKGBUILD   | 43 +++++++++++++++++++++++++++++++++++
 BioArchLinux/r-grf/lilac.py   | 13 +++++++++++
 BioArchLinux/r-grf/lilac.yaml | 16 +++++++++++++
 3 files changed, 72 insertions(+)
 create mode 100644 BioArchLinux/r-grf/PKGBUILD
 create mode 100644 BioArchLinux/r-grf/lilac.py
 create mode 100644 BioArchLinux/r-grf/lilac.yaml

diff --git a/BioArchLinux/r-grf/PKGBUILD b/BioArchLinux/r-grf/PKGBUILD
new file mode 100644
index 0000000000..0487a79a97
--- /dev/null
+++ b/BioArchLinux/r-grf/PKGBUILD
@@ -0,0 +1,43 @@
+# Maintainer: Boris Shor <boris@bshor.com>
+
+_pkgname=grf
+_pkgver=2.6.1
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Generalized Random Forests"
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL-3.0-only')
+depends=(
+  r
+  r-dicekriging
+  r-lmtest
+  r-rcpp
+  r-sandwich
+)
+makedepends=(
+  r-rcppeigen
+)
+optdepends=(
+  r-diagrammer
+  r-knitr
+  r-mass
+  r-policytree
+  r-rdrobust
+  r-rmarkdown
+  r-survival
+  r-testthat
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('5695490194b2e49efafbfe7ce68bd28c')
+b2sums=('b1552a47fad1328e971719f1824a77d226169d1df05654b5786c3dc7703273ec731cd1cebc49a0c9f8d2a700edf3c408f875bf65bbd749fcf3c52a52a6cece35')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
diff --git a/BioArchLinux/r-grf/lilac.py b/BioArchLinux/r-grf/lilac.py
new file mode 100644
index 0000000000..9244fd6914
--- /dev/null
+++ b/BioArchLinux/r-grf/lilac.py
@@ -0,0 +1,13 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+import os
+import sys
+sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
+from lilac_r_utils import r_pre_build
+
+def pre_build():
+    r_pre_build(_G)
+
+def post_build():
+    git_pkgbuild_commit()
diff --git a/BioArchLinux/r-grf/lilac.yaml b/BioArchLinux/r-grf/lilac.yaml
new file mode 100644
index 0000000000..1ebe70571e
--- /dev/null
+++ b/BioArchLinux/r-grf/lilac.yaml
@@ -0,0 +1,16 @@
+build_prefix: extra-x86_64
+maintainers:
+  - github: bshor
+    email: boris@bshor.com
+repo_depends:
+  - r-dicekriging
+  - r-lmtest
+  - r-rcpp
+  - r-rcppeigen
+  - r-sandwich
+update_on:
+  - source: rpkgs
+    pkgname: grf
+    repo: cran
+    md5: true
+  - alias: r

From 185a3bd623fb532b1d67a145a194a2cf688fd4d8 Mon Sep 17 00:00:00 2001
From: Boris Shor <bshor@users.noreply.github.com>
Date: Mon, 8 Jun 2026 12:25:18 -0500
Subject: [PATCH 3/3] r-dsl: init pkg

---
 BioArchLinux/r-dsl/PKGBUILD   | 32 ++++++++++++++++++++++++++++++++
 BioArchLinux/r-dsl/lilac.yaml | 19 +++++++++++++++++++
 2 files changed, 51 insertions(+)
 create mode 100644 BioArchLinux/r-dsl/PKGBUILD
 create mode 100644 BioArchLinux/r-dsl/lilac.yaml

diff --git a/BioArchLinux/r-dsl/PKGBUILD b/BioArchLinux/r-dsl/PKGBUILD
new file mode 100644
index 0000000000..928b3869c6
--- /dev/null
+++ b/BioArchLinux/r-dsl/PKGBUILD
@@ -0,0 +1,32 @@
+# Maintainer: Boris Shor <boris@bshor.com>
+
+_pkgname=dsl
+_commit=537664a54163dda52ee277071fdfd9e8df2572a6
+pkgname=r-${_pkgname}
+pkgver=0.1.0
+pkgrel=1
+pkgdesc="Design-based Supervised Learning"
+arch=(any)
+url="https://github.com/naoki-egami/dsl"
+license=('GPL-2.0-only')
+depends=(
+  r
+  r-arm
+  r-estimatr
+  r-grf
+  r-matrixcalc
+  r-superlearner
+  r-tidyverse
+)
+source=("${_pkgname}-${_commit}.tar.gz::${url}/archive/${_commit}.tar.gz")
+md5sums=('3d52bfb2175b65b7b2ca6a194d235737')
+b2sums=('70b1103ea3aa4720b5f9b5ccbc7621ce93872e330da942e478fd74c8f8633a3b300719df221f351f19090a4547c089d0ee453d66b681e967ef5cab97c3f018dc')
+
+build() {
+  R CMD INSTALL ${_pkgname}-${_commit} -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
diff --git a/BioArchLinux/r-dsl/lilac.yaml b/BioArchLinux/r-dsl/lilac.yaml
new file mode 100644
index 0000000000..81f2d3830f
--- /dev/null
+++ b/BioArchLinux/r-dsl/lilac.yaml
@@ -0,0 +1,19 @@
+build_prefix: extra-x86_64
+maintainers:
+  - github: bshor
+    email: boris@bshor.com
+repo_depends:
+  - r-arm
+  - r-estimatr
+  - r-grf
+  - r-matrixcalc
+  - r-superlearner
+  - r-tidyverse
+pre_build_script: |
+  update_pkgver_and_pkgrel(_G.newver)
+post_build_script: |
+  git_pkgbuild_commit()
+update_on:
+  - source: manual
+    manual: '0.1.0'
+  - alias: r